Salvia miltiorrhiza (redroot sage): 131022722
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Entry
131022722 CDS
T09291
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131022722
Spliceosome [BR:
smil03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
131022722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
INTS4_8HBD
Motif
Other DBs
NCBI-GeneID:
131022722
NCBI-ProteinID:
XP_057808217
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Position
4:11541512..11547534
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AA seq
965 aa
AA seq
DB search
MCISVGPKYSVLFYNFRPKYKIKELGPKFKIAKVTSSPHQRPPLLMEQRLVAAVGRNPNL
SPKSSVAVLSLITNPCTSDSTLTTIVETLNLHLQNPNSNHQQILSLLSALSDYHPRLRHR
VGAAVHAFILLPSTPTSALPHALSFLNPADSTALDLFSDESLFLSLCFYECVKTRKWMLR
NVSKFRMRPSVLLTVLLGFTKDPYPYIREAALDGLVMILNDGVVVEDRSLVGGCYFRAAE
LLFDADNSVRRSAVRAVSEWGHLHVALNPDESKRDWSDALFLQLCLMVRDMDMEVRVAAF
NALGKIPTVSENILLQTLSKKALPSTKEKVYPGRYTAKLSKIPATAAAFAFLHGLEDEFF
QVRRSACRALQTPTVLSAEFSCGTVDILMDMLNDDLVMVRLQALETLHHMATYGHLNVAE
SHLHMFFSVLIDNDALIRSAMRKTLQYTKLQKLAMFRSCIENLIKNLELYPEDEADIFYA
LYRIGCLHRKFVVKIIQEVSQELEPSFDGKLGFNKVRTAGLFVLAISAPVSLERKTSSIP
PQIFSYAVTLLGRISCGLVEVVDENTLLTYLSQCSRFTFTSTSENFEGGLLDFGLKYNHN
HLHEKSNEVSSLFPVTMGPKKFTTPLESQVKAMSCVEIIFQKVVDLWPLIQLGCMNEVTR
TLRSWKEGISSFTRDTHQTAGVVVFALKYIHIIKLLGNAWAYSFTKTNLQLKGMGALENL
LGKMERRLSEMLYRYVGMSRNEELHILELMLVTYAMRLSHGDTSCFEEYTKKLNSVIRSV
ECLHKEGPVEGSHFVTELLNVSHEIGDSEDKAVDMPDLLLNSLKLFSLKRIVLSGELKYL
DAELDACGNDFQKPLPFVPGLPVGIPFEITLRNMSSEIKLWLAISVGEKSTQFVFLDLDE
FGGSEKFKFVAPFFRTPRVKHLVLKVSIAMEYLSEDRYVKRYNGPKHELVYLSRGTEVHL
SMVVR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatatccgtcggcccaaaatattcagttttattttataatttccggcccaaatac
aaaattaaagaattgggcccaaaattcaaaattgcaaaagtaacgtcttctccccatcaa
cgtccgccgctactgatggagcaacgcctcgtcgccgccgtcggccggaaccctaatctc
tctcctaaatcgtcagtcgccgtcctctctctcatcaccaacccctgcacgtccgactca
actcttaccaccattgtagaaaccctaaacctccatctccaaaatcctaattctaaccac
caacaaattctctcactcctctccgctctgtccgactaccacccccgcctgcgccaccga
gtcggagccgccgtccatgccttcatcctcctcccctcaacaccaacctccgccctaccc
cacgctctttcgtttctcaacccggcggattccaccgcactcgacctcttctccgatgag
tcgttgtttctctccctctgtttctatgagtgcgtgaaaacgagaaaatggatgctgagg
aatgtgagtaaatttcgcatgaggccatcggtgttgctgacggtgctcttagggtttact
aaggatccttatccctatattagggaagctgcattggatggtttggtgatgattttgaat
gatggtgttgtggtggaggatcgaagtttggttggaggttgctactttcgtgctgcagag
cttctgtttgatgcggacaattcagtgcgacggtcggctgtgcgcgcggtcagtgaatgg
gggcatttgcatgttgcattaaacccagatgaaagtaaaagagattggtctgatgcatta
tttctacagctttgcttgatggtaagagacatggatatggaggtaagggttgctgctttt
aatgcgcttggaaagattccaactgtttcagagaatatattgcttcaaaccttatctaag
aaggctttgccatcaaccaaagaaaaagtttacccaggccggtacactgctaaattatct
aaaattccagcaactgctgctgcatttgcttttcttcatggattggaggatgaatttttt
caggtcagaagatctgcttgccgtgctctgcaaactccgacggtcctatctgctgaattt
tcttgtgggactgtagacatattgatggatatgctgaatgatgacttggtgatggtacgc
ttacaagcgttggagactctgcatcatatggctacatacggccatctaaatgtggcagaa
tctcacctgcacatgttctttagtgttttaattgacaatgatgccttgataaggtctgca
atgaggaagactctccagtatactaagttacagaagttggcaatgtttcgatcttgcatc
gagaatcttataaagaacttggagctctatccagaggatgaagccgatatcttttatgct
ttatatagaattggttgtttgcatagaaaatttgtagtcaagatcattcaagaggtttct
caagagttggagccttcctttgatggcaagttgggatttaacaaggtgagaacagctgga
ttgtttgtgctggccatctcagctcctgtgtcacttgaacgaaaaaccagcagtatccct
ccacagatattttcttatgcagttacactcttgggtagaatatcctgtggtcttgttgag
gttgtggatgagaacacccttttaacatatctatctcagtgcagcagattcacttttaca
tcaacttctgaaaattttgaggggggattactggattttggtttgaagtacaatcataat
cacttacatgaaaagagtaatgaagtttcctctctttttcctgtaacaatgggacctaag
aaattcacaactccccttgagtcacaagttaaagctatgagctgcgtggaaattatattc
caaaaagttgttgatttgtggccgctgattcaactcggatgcatgaatgaagtaactcga
acattgaggagttggaaagaggggatcagtagttttactcgcgacacacaccaaactgcg
ggtgtcgtggtttttgctttgaaatacatacacataattaaactgcttggaaatgcttgg
gcatattcttttactaagacaaatctccagttgaaagggatgggagctttggagaacttg
ttgggtaaaatggaaaggagactctcagaaatgctatatagatacgtgggaatgagcaga
aatgaagaattacatatcctagagctaatgcttgtgacttatgctatgagattgtctcat
ggagacacctcgtgttttgaggaatatacgaagaaactgaattctgtgattcgtagtgtt
gaatgtcttcataaagaaggtccagttgaaggttcacattttgtgactgagctcctgaac
gtatcacatgaaattggtgactcggaggacaaagccgtggacatgccggacttgcttctg
aactctcttaagctcttctcgctgaagcgtattgtgttatctggagagctaaaatacctt
gacgcggaattggatgcttgtggtaatgatttccaaaagcctctcccttttgttccaggt
ttacctgttggtattccatttgagatcacattgcgcaacatgtctagtgaaatcaaattg
tggcttgcaatttctgttggtgagaaatcaactcagtttgtcttccttgatttggatgaa
tttgggggatccgagaagtttaaatttgttgctcctttctttaggacacccagagtgaaa
cacttggtattgaaggtttccatagccatggaatacttgtccgaggatcgatatgtgaag
cgctacaacgggcccaaacacgagctcgtctacctttccagaggcacagaagttcatctg
tctatggttgttagatga
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