Sphingobacterium mizutaii: 4412673_03319
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Entry
4412673_03319 CDS
T05395
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4412673_03319 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_03319 (nth)
Enzymes [BR:
smiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
4412673_03319 (nth)
DNA repair and recombination proteins [BR:
smiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4412673_03319 (nth)
Prokaryotic type
4412673_03319 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF2400
DUF763
Motif
Other DBs
NCBI-ProteinID:
SNV56667
UniProt:
A0AAJ5C1K2
LinkDB
All DBs
Position
1:3781231..3781893
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AA seq
220 aa
AA seq
DB search
MLIKERYKAFVEYFSTHNPDAQTELNYGNPFELLIAVILSAQCTDKRINQVTPALFERYP
NPESLAASSSDEVFTYIKSVSYPNNKAKHLVGMAQKLLSEFHGEIPEKVEDLVKLPGVGR
KTANVISSVVFHNPAMAVDTHVFRVADRIGLTNKATTPLAAEKQLVKHLPKDTIAMAHHW
LILHGRYICLARSPKCDICPISYFCRYFERNKKAKLVHKD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctgataaaagaacgttacaaggcttttgttgaatatttttctacccataatcccgat
gctcaaacggaactgaattatggcaatccctttgaattgctgattgcagtaatcctttcc
gcacaatgcacggacaaacgcatcaatcaggtcactcctgctttatttgaacgatatcct
aaccctgaatccctagcggcaagctcctccgatgaagtattcacttatattaagtcggta
agttatcctaacaacaaagcaaagcacttagttgggatggcgcaaaagctcctgagtgaa
ttccatggagaaatccctgaaaaggtagaagacctggtcaaacttcctggagtaggaaga
aaaacagccaatgtaatttcttctgttgttttccataaccctgccatggcggtagatacc
catgtgttccgtgtcgccgatagaattggtttgaccaataaggcaacaactccgcttgca
gcagaaaagcaacttgtcaaacatttacccaaagataccatagctatggctcaccattgg
ctcatcttacatggtcggtatatatgcttggctagatcgccaaaatgcgatatttgccca
atctcctatttttgtcgatattttgaacgaaataaaaaggcaaaattggttcacaaagat
taa
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