Sinorhizobium meliloti AK83: Sinme_3520
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Entry
Sinme_3520 CDS
T01521
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk01501
beta-Lactam resistance
smk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sinme_3520
01503 Cationic antimicrobial peptide (CAMP) resistance
Sinme_3520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smk03036
]
Sinme_3520
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smk02000
]
Sinme_3520
01504 Antimicrobial resistance genes [BR:
smk01504
]
Sinme_3520
Chromosome and associated proteins [BR:
smk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sinme_3520
Transporters [BR:
smk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sinme_3520
Antimicrobial resistance genes [BR:
smk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sinme_3520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
CzcB_C
BSH_CzcB
Beta-barrel_RND_2
HH_CzcB
HH_AAEA_pHBA
BSH_CusB
DUF5801
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
AEG55225
LinkDB
All DBs
Position
1:complement(3643129..3644547)
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AA seq
472 aa
AA seq
DB search
MVIFTFLPPLPARRNSVALRQKLTYIGVCILAFRYFPRRYRLRFTSLWDRAALAKRRDCG
RSFDNMDIAMRMNRPILAAALASVIFLAGCQKNEEQQAAAAAPPPSPVAVFTTKAEPLPI
TNELPGRITATRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAEATL
KRAQAVVDQAKRTADRQSRLKEAQVTAVQQYDDAIAALAQAEADVGIAEAGLAEAKLNLQ
YTNVTAPISGRIGRALITEGALVNTNDPQNLATIQQLDPIYADFTQSATDLIRLRKALKD
GQWMSAKNEAEVQLILDDGTPYALKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMY
VRVQIQQGLEKDAITVPQQAVQRNNAGQSQVYVVNADNKVEFRNVTLGRTVGERWQVTSG
LKPGEKVIVEGFQKVGPGAPVQPSDWDPNAKPAPEQASASADAGEKPATEVK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatcttcacttttttgcctcccctgccggcgcgtcgaaactctgttgcactgcgg
cagaaattaacatacattggcgtctgtatattagctttccggtattttccacgccgatac
cggctccgcttcacctcactttgggaccgcgcagcgcttgcgaaacgccgcgactgcggc
cggtcctttgacaatatggacattgcgatgcgcatgaaccgaccgatattggccgccgcg
ctggcatccgtgatttttctcgcgggctgccagaagaatgaagaacagcaggcagcggct
gccgcccctccgccgtcgccggtcgccgtcttcacgacgaaggcggaaccgctgccgatc
accaacgaactgccgggccgcatcaccgccacccgcatcgccgaagtccgcccgcgcatc
tccggcatcgtcgtcgagcgggtgttcgagcagggcaccatggtcaaggaaggcgacgtg
ctctaccgcatcgacccggcaccgtttcaggtcaaggtcgacagcgccgaggcgacgctg
aagcgcgctcaggcggtggtcgatcaggccaagcggacggccgaccgccagtcgcggctg
aaggaggcgcaggtcaccgcggtgcagcagtacgacgatgccatcgcggccctcgcccag
gccgaggccgatgtcggcatcgccgaggcagggctcgcggaggccaagctcaatctgcag
tatacgaacgtcacggctccgatcagcggccggatcggccgggcgctgatcaccgaaggc
gcgctcgtcaacaccaacgatccgcagaaccttgcgacgatccagcagctcgacccgatc
tatgccgacttcacccagtcggcgaccgacctgatccgcctgcgcaaggcgctgaaggac
ggccagtggatgagtgccaagaacgaggccgaggttcagttgatcctcgacgacggaacg
ccctacgcgctcaagggcaggctgctcttctccgaagccgccgtcgacgcgacgacgggc
caggtgacgctgcgcggcgaattccccaacccgaacaacgatctgctgccgggcatgtat
gtccgcgtccagatccagcagggtttggaaaaggacgcgatcaccgtgccgcagcaggcc
gtgcagcgcaacaatgccggccagtcgcaggtctatgtggtgaatgccgacaacaaggtt
gaattccgcaacgtcacgctcggacgcaccgtcggcgagcgctggcaggtgacctccggc
ctcaagcccggcgaaaaggtcattgtcgagggtttccagaaggtcggcccgggcgcgccc
gtgcagccatccgactgggacccgaatgcaaagcccgcgcccgaacaggccagcgcttcg
gcagatgccggcgaaaagcccgccaccgaagtgaagtga
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