Stenotrophomonas maltophilia K279a: Smlt1556
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Entry
Smlt1556 CDS
T00718
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Smlt1556 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt1556 (nth)
Enzymes [BR:
sml01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Smlt1556 (nth)
DNA repair and recombination proteins [BR:
sml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Smlt1556 (nth)
Prokaryotic type
Smlt1556 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAQ45089
UniProt:
B2FIF5
LinkDB
All DBs
Position
complement(1619900..1620589)
Genome browser
AA seq
229 aa
AA seq
DB search
MATTKKTARAPARRGGTMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQAT
DVGVNKATRRLFPVANTPAKILALGEEGLKQYIATIGLFNAKAKNVIATCAILLEKHGGE
VPRDRDALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVREVEDKL
VKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKDKTPAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgaagaagaccgcacgcgccccggcgcggcgtggcggcacgatgccgcgc
gccgacgtggtggagatgttcacgcgcctgcgcgaactcaacccgcacccgaagaccgaa
ctggagtacagctcgccgttcgagctgctggtggcggtggcgctgtcggcgcaggccacc
gacgtcggcgtcaacaaggccacgcgccgcctgttcccggtggccaacacgccggcgaag
atcctcgcgcttggcgaagaaggactgaagcagtacatcgccaccatcggcctgttcaac
gccaaggcgaagaacgtgatcgcgacctgcgcgatcctgctggaaaagcatggtggtgaa
gtgccgcgcgatcgcgatgcgctggaagcactgccgggcgtgggccgcaagaccgccaac
gtggtgctcaacaccgccttcggcgagccggtgatggcggtggacacgcatatcttccgc
gtctccaaccgtaccggcctggccccgggaaagaatgtgcgcgaagtggaagacaagctg
gtgaaggtgatccccgccgaattcctgctcgacgcgcatcactggctgatcctgcacgga
cgttatgtgtgcaaggcgcgcaagccggattgcccgggatgcgtgatcgccgatctgtgc
cggttcaaggacaagaccccggccgagtga
DBGET
integrated database retrieval system
