Schistosoma mansoni: Smp_142550
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Entry
Smp_142550 CDS
T01095
Name
(RefSeq) nuclear pore membrane glycoprotein gp210-related
KO
K14314
nuclear pore complex protein Nup210
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_142550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_142550
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_142550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_9th
GLEYA
Ig_NUP210_6th
Motif
Other DBs
NCBI-GeneID:
8351927
NCBI-ProteinID:
XP_018648597
LinkDB
All DBs
Position
1:33759219..33799467
Genome browser
AA seq
2192 aa
AA seq
DB search
MLIVLALALLPIVYCDFKLSDSKLLLPYYSVNPVNYTLHGSEGACYEWHSGTPEVAVVSP
VVSSENSCSSAAVITAVWQSRHRAVATIYAKIINADHIVKCDVIVDDINRIEIATTTQEL
YLHNTPVPLIVTAYDEYGNTFTSLEGVPFEWRIFEDKYEEFGDIQGVLRFITWRESEYTT
PSTMALLESKGMQGYMQLISGLRTGSAVVSVALHESIYKNVAPSQVRLLVMANAQLSPAL
AYLVPNSLLTFTVHVIQQGDDQEVSMPSLQYHLQVNDTNLAVLNPLDGSTLKALNYGQTE
VTLLDRNVEEALEKLDEVLNSKVDDSDLRLPKRRRPTSLIQIVEPAYLGFTLIQKYTNKN
PDICQLASFLNSGSYVNQVASGSYMPIRRWIMESGKVYVINLDIYDRNNHRLYPSDNLRL
SLYFPESHFEILKSSLNQTYVVVRAFSSGSVSLKAVLRGVVDQDGNVVEFNSTITGNQDV
TIYSPIKIYPTPVILPWSTGLLSPNLTHSDHGYHLRANGGCGQYRWTALSVRALEHHSDP
GKLPNSELLTNTVVSITKTGVISALNPGESIIVASSSSNPQICGYTVVYVRPPSEMKFVY
ERNEVLIPPRRNAKFIDEELTRSYSNQPTNEEWSVRDPSAVEFDLERLAIGLAVLDSDGQ
SMTDCRNLNIEIRAVDSNVVKIIPGFHAPRLNSSTEYGLFDSNECLHFYVIGVNVGFTEI
KAIYNPSPVNKFDESVLIVSRVHVAAYRKINFIDPVSEVTPVAIGSTRNMLVTHGPQPWP
LQLSEHYVDVFPQPDADNDISSLPTLISEPHFSKTVYQKTNFDDEAKPVQSYIMDQTEGH
VRLVSFSLRCESIGMFEFVIEIGNRPTPSNLHPMVLSSKFTIMCDVAVSLQLLPVFQFPS
LPPHFPPCPLVNISSNDWSHDKLILPNTIPTVIHLIFFGSESQELESVDSLVSNVVISSI
DDDRGTTEKLQLVQYVDPPVQMDYSDYDKRSFNRRMHSRPYFLITPANLGHSSGSLAVHV
TVHSSLPNRYVPFLPGIQGLKSILNIYLSPVINAVPSQLIKLFYHSEASSTVYIHGGSGY
YYLENSGNLTDRHHYPIRITEKLNEPTLATHTIPYIMPRRTYEIQPQHVGRVTIQAIDLC
FPSTKSNPSNEYNLSPSQAEFNVDVIGLSALNLRVHNQIQLGDEVTAFVEAIGTDGITLP
SKCARLLKLSIISDHVTHSTSTGHKESSHDSKRILRVPETYVPSDSFWICDSSNAEEPCS
GQFTVRGIALGTSKLMITSIVPGLLYGKPITVQSNVVEIQVFAPLRLTPCNFNLLLGAEY
ELHAVGGPSQASLEFIPESISSRIIIVKTNPSSVLIRASESLGLANIRARAVGMTGNKLS
SSLDEKRDDYVIYSETVCNIHIVALSGVRIRCPLANLDEITSQISDSSNANIPELSNSDR
SDRHFLLACPPGRSDDCGSTPLWVEGTAYSPYFSEDQSISNIVSPLGMAAVNPPLRYRWH
LNPPEPNSFVRLEYWLDRFGINMDETHLASGMVLVGLKPGTVTVHLTVEPVEPYAKQIIA
VSTDGMSTDRLHAQLTIVVLSRLGLSSPHREPQQIILSPNSQLNLIPWTDLHSDSILQYK
ILTVPHNRNLSLEHASQFLTVTPDGILRANDKCSESGLVCRVTLQIQSMPNGNLVNSKYT
HNFDNSLIQTLILDVLIKVPRYMMFSVPSITIPQNERLSKVVGLPVGGPYNIKISYHDEL
GRVFDAVSNDFYRLKASLHRSDLFSTHFIRDFIIEQNFPVNNINSYNPIRHAAFGFSIHS
LPFSKSTNQVEFIQDEKNSHWAALRIGLSNKINGVSPSYLSLPYSNSLDLLGLTSLIEGQ
WMCLPKFSSSTSYSDLDNTWSSVDPSIIWIDPLNQIILARHSGQGVLTFSLTSSVKTYQQ
IETVKNTTYSNMKSEPLTYLINLQVIPLELYTSGIPSASLIFVDSGNNVLQSESIIFPIG
VDRPSRSESFLSILRFLIQLPIKESNDIPCSKTPGSLLTFENFAPFKCQIQLQIDDEFHI
DFNYRSSLLPNWFSHLLLWEHNETIESILELESAKFSLQRYITTQLEPLSQSSPFHTSST
QWQCVIKSPTTWSLNVDAISLTLMPKTRMILQLVKTHVSGNIEQGENSSLIAQTSLLPLP
GIRILIPPAVKLQEDSHMSTSKDLFMPIMHMT
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcgtgctcgcattagctttgctccccattgtttattgcgactttaaattaagt
gattccaagctccttctgccttactacagtgttaatcctgtgaattacaccctacatggt
agtgagggggcctgctatgaatggcactcgggcacaccggaggtagcagtagtaagccca
gtagtatcatctgagaatagctgctcttcggctgccgttataactgcggtttggcaatca
cgacacagggccgttgccaccatatatgccaaaataattaatgctgatcacattgtcaag
tgtgatgtaatcgttgacgacataaatcggatagaaattgccactaccacacaagagctt
tatctccacaatacgccagttcctcttatagtaactgcttatgatgaatatggcaatacc
ttcacgtcacttgaaggtgtaccattcgagtggcgtatatttgaagacaaatatgaagag
ttcggagacattcagggtgttttaagatttattacgtggagagagtcggaatatacaact
ccaagtacaatggctttactggagtcaaaggggatgcagggctacatgcaattaataagt
ggtttgcgtactggctctgcggtcgttagtgtggctcttcacgagtcaatttacaagaat
gtggcaccaagtcaggttcgtcttctcgttatggcaaatgcccagttgagcccagcacta
gcctatcttgtcccgaattcccttctgactttcactgtacacgttattcaacagggtgat
gatcaagaggtctccatgccatctctacaataccacttgcaggtgaacgacacaaacttg
gctgttcttaacccacttgatggttcaactcttaaagctctaaattatggtcaaacggaa
gttacacttcttgatcgaaatgtcgaagaagccctagaaaaattggacgaagttttgaat
tccaaagtcgatgattcagatcttcgtctgccaaaacgaagacgtccaacttcactcata
cagattgtagagccagcatatttgggttttacactcattcagaagtataccaataaaaat
ccagatatatgccaactggcttcatttttaaactcagggtcatatgttaatcaggttgca
tccggttcttatatgcccattcgaagatggataatggagtcagggaaagtttatgttatt
aatctagacatatatgatcgtaataaccaccgtctatatccctcagacaatctgcgactg
tctctttattttccagaaagccactttgagatcttaaaatcttcgttaaatcaaacttat
gtcgttgttcgagcattttcatctggttcggtgtctctcaaggctgtcttaagaggtgtc
gtagatcaggacgggaatgtcgtggaattcaattcaaccataaccggcaatcaagatgtg
accatttactctcctatcaaaatctatccaacaccagtcattttaccgtggtctacagga
ctactatcgcctaacctcacacattctgatcatggttatcatctacgagctaacggagga
tgtggacagtatagatggacagcgttatctgtccgcgcattagaacatcattctgatcca
ggcaaattaccgaactccgaattactcactaacacagtcgtgtccattactaaaacaggg
gttatatcagctctaaatcccggtgaatctatcatagttgcatcaagctcttcgaatcct
caaatttgtggatatactgtagtttatgtgcgtccaccttctgaaatgaaatttgtatac
gaacgcaatgaagttctaattccacctcgtcgtaatgctaagtttattgacgaagaatta
acgagaagttattcgaatcagccaacaaatgaagaatggagtgtacgagatccctctgcc
gtagaattcgacttggaacgtttggcaataggattagctgttcttgattctgacggtcaa
agtatgacggattgcagaaatttaaacattgaaattcgtgcagtcgactctaatgttgtg
aagattatcccaggttttcatgcaccacgacttaattcatctactgaatatggattattc
gattctaacgaatgcttacatttttatgtgatcggagttaatgttggtttcactgaaatt
aaagcaatctacaatccctcaccagttaacaaatttgatgaatccgttttaattgtttca
cgtgttcatgttgccgcatatcgtaaaatcaattttattgatcctgtttctgaagtaact
cctgttgcaataggttcaactcgaaatatgctagttacacatggaccacaaccatggcct
ttacaactatcagaacattacgtcgacgtttttccacaacccgacgcagataacgatatt
tcatcacttccaacattgattagtgaaccacatttctctaaaacagtttatcaaaagact
aactttgatgatgaagctaaaccagttcaaagttatattatggatcaaactgaaggtcat
gttcgcttggtttcattcagccttcggtgtgaaagtattgggatgtttgagtttgtgatt
gaaattggaaatcgtcccactccctctaatttacatcccatggttctgtcatccaagttc
acaataatgtgtgatgtcgcagtcagtctgcagttactacctgtttttcagtttccttca
ctacctccacactttccaccttgcccattggttaacatatcttccaatgactggtcccat
gataagttaattttaccgaatacaatcccaactgttattcatttgattttctttggatca
gaaagtcaagaattagaatcagttgattcacttgtatctaatgtggttatttcttcaatt
gatgatgatagaggaactacagagaaattacaattagttcaatatgtagatccacctgta
cagatggattattcagattacgataaaagatctttcaatcgtcgtatgcattcgcggcct
tattttctcattacaccagccaaccttggtcattcttctggtagtctcgcagttcatgtt
acagtccattcaagtttacctaacagatatgttccatttttacctggtattcagggccta
aagtctattttaaatatatatttgagtccagtgataaacgcggttcccagtcaattaatt
aagttattttatcattcagaggcttcatctactgtgtatattcatggtggatctggttat
tactacctggagaattcaggcaatctaacagatcgacatcactatccaattcgtataact
gagaaattgaatgaaccaactttagcaacccatactataccgtatatcatgccgagacgg
acttacgaaatacaaccacaacatgttggtcgtgtaacaattcaagcaattgacttatgc
ttcccatcaacaaaatcaaacccatcaaatgaatataatcttagtccatcacaagctgaa
tttaatgtagatgtaattggtcttagtgcattaaatcttcgagttcacaatcaaatacaa
cttggtgatgaggttactgcctttgtagaggctataggtacagatggaatcacattacca
tcaaagtgtgcacgtttactgaagttgtcaatcatcagtgaccatgtcactcattccaca
tctactggtcataaagaatcatcacatgactcgaaaagaatacttcgcgtaccggaaact
tatgtcccttcagattcattctggatttgtgattcatcaaatgctgaagaaccttgttct
ggtcaatttacagttcgaggcattgctcttggtacttctaaactaatgataacttctata
gtacccggcttattatatggtaaaccgattactgttcaaagtaacgttgttgagattcag
gtgtttgcacccttacgtttgactccatgtaacttcaatcttcttctaggagcagaatac
gagctccatgcagtgggtggtcctagtcaagcttcattggaatttattcctgagtctatc
tcaagtcgtataataattgtgaaaacaaacccttccagtgtcttaatacgtgcatctgaa
tccttaggtttggcaaatattcgtgctcgtgcggtaggcatgacagggaataaactttct
tcaagtttagatgaaaagcgtgatgattatgttatttattcagagacagtttgcaacatt
catattgtggcgttgtctggtgtacgaattcgatgcccacttgctaacttggatgaaatt
acttctcaaatctctgattcttccaatgctaatatcccagaattatctaattcagatagg
tctgatcgacattttcttcttgcatgccctcctggacgctctgacgattgtggttcaaca
ccgttatgggttgaaggtacagcatacagtccttatttttctgaagaccagtcaatatca
aacattgtttctcctttgggaatggccgctgtcaatcctccactacgctatcgttggcat
ttaaatccacctgaacctaactcttttgttcgtttagagtattggcttgatcgattcggt
attaatatggatgaaactcatttagcatctggaatggttcttgtcggtctgaaacctggt
actgtgactgttcatttgactgttgaacctgtagaaccttatgcaaaacaaataattgct
gtatctactgacggtatgtcgactgaccgcttacatgctcaactaacaattgttgtttta
tcacggcttggactgagttcaccacaccgggaacctcaacaaataattctatcgccgaat
tcccaattgaatttgattccttggactgatttacattctgatagcattttacagtacaag
attttaaccgttccacataatagaaatctatcgttagaacacgctagtcagtttttaact
gtcactccagatggtattctgcgtgcgaatgataaatgttcagagagtggattagtttgt
cgagttacacttcaaattcaatcaatgcctaatgggaatttagtgaattcaaagtataca
cataattttgacaattcacttattcagacattaattttggatgtattgattaaagtgcca
cgttatatgatgttctccgtaccttctattactattccacagaatgaaagattgtcaaaa
gtagtgggacttcccgttggcggtccatacaatattaaaatctcgtatcatgatgagtta
gggcgtgtattcgatgcagtttcaaatgatttctaccgattgaaagcatcacttcatcga
tcagatttgttttctacccattttatacgagattttataattgaacaaaatttccctgta
aataatataaactcatacaacccgattcgtcatgctgcttttggttttagtatacattcc
ttgccattttctaagtcaactaatcaggttgaattcattcaagatgagaaaaattctcat
tgggctgccttacgtattgggttatcgaataaaattaatggtgtatcaccaagttattta
agtctaccatatagtaattcgttagatcttcttggtttaacatctttaatagaaggacaa
tggatgtgtttgccaaagttctcatcatccacaagctattcagatttagataatacttgg
tcttcagttgatccatcgatcatatggattgatccattaaatcaaataattttagcacgt
cattccggtcaaggagtattaacattttctttaacatcttcagtaaaaacttaccagcaa
attgaaacagtaaaaaatacaacctattcaaatatgaaaagtgaaccacttacttattta
attaatttacaagttattccacttgaattatatacatccggtataccatctgcaagtttg
atatttgttgattctggaaataatgtactacaaagtgaatctatcatatttcctattgga
gttgatcgtccatcacgaagtgaatcatttctatcaatattacgttttcttattcaacta
cctatcaaagaaagcaatgatatcccatgctctaaaacacctggatcacttttaacattt
gaaaattttgctccattcaaatgtcaaattcaattacaaatagatgatgaatttcatatt
gattttaattatcgttcaagtctattaccaaattggttttcacatttacttctttgggag
cataatgaaactattgaatcaattcttgagttagaatctgctaagttttcactacaacga
tatattacaactcaactagaacctttatcacaatcctcaccatttcatacaagttctaca
caatggcagtgtgttataaaatctcctacaacatggtcgttgaatgttgatgctatttct
ctaacactaatgcctaaaacacgaatgattttacaattggttaaaacccatgtgtctggt
aatattgaacagggagaaaattcatcattaattgctcaaacgtcgttacttcccttgcca
ggtattaggattcttattcctccagctgttaaactacaagaagatagtcacatgtctacg
tctaaagatttgtttatgccaatcatgcatatgacttaa
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