KEGG   Schistosoma mansoni: Smp_194900
Entry
Smp_194900        CDS       T01095                                 
Name
(RefSeq) putative wd-repeat protein
  KO
K19656  intraflagellar transport protein 122
Organism
smm  Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:smm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:smm03037]
    Smp_194900
Cilium and associated proteins [BR:smm03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   Smp_194900
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 Zn_ribbon_IFT122 WD40_WDHD1_1st Zn_ribbon_IFT122_C ANAPC4_WD40 EIF3I Beta-prop_NUP159_NUP214 TPR_GEMI5 Beta-prop_CAF1B_HIR1 NBCH_WD40 WDR55 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TPR_IFT80_172 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_WDR35_2nd Clathrin TPR_2 TPR_ELP1 TPR_8 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 8349524
NCBI-ProteinID: XP_018652437
LinkDB
Position
4:28143955..28196668
AA seq 1205 aa
MDTAQVWSFKVKGKDGVTNCIWDLCYSPDGSQLIVASGNLVWVYKADNGSLIKNLKGHKD
TVYCVAYAHDSSIFGSGSADKCVIIWKSSTLEGLLKYMHTESIQCLEFNPVTVLLASTGS
TDFGFWTMDQKSVVKTKISARPTCCSWMSDGQFLAIGLYNGVISIRNKETEEVVKIERPG
NPITWHLKWNPSKNGHGEILAVVDWNQKLSFYQLNGRQTGKDYLLGYDPCNITWFGNKYE
SLAICGSNKMCQLYNNEGIRLACINKQQTWIWCCCTRNGYNQIVVGCQDGTLETVQLLLD
PVYSFHKDRYAYRESLTDVVVQHLITEQKVVNILVPQGFIYCPNISLIQLPEKILIYESS
SDDMKDMHYRINTKLLEQIHCQYLIIITNHLIVGQTNCLTCINFKGIKEREWIVDSPVNC
IRIIGGPPNKEGLLLGLKNGQVVQIIVDNTFPIHLTKIMNEVYSVDISRNRDKLAIVDSN
KTMIVYSLEKQESLFQEPNVSSISWSTTNNELLAYTGNDLLFIKNGQFPSHRQYNKGQTL
NFTGSFIYCLHENTINRVEISLSPAVYHYLGTGQLNEAYHLACFGLTDQDWKVIGRMALN
KLNLKVAKCAYIQLDDILMLTFIQQLEERYKRGEWNNQELINKSSNVLTILGDISAYLGH
FNEAVAYYTQANSTNINHKIIDMYTDLRRFNEAHEMLKSNNDINEHKLLLVKNADWAKST
NEYRTAVKMYMDAGEFIKAIELSDLHGWTDILLDISRRLDKDDHEYLERCARSLTRLGEY
AFAADCYAKYGDIENQLNLYIESHNWEEAFNLVEKHHDYTRKVYLPYANWLAENDKFEEA
QTAFIKAGLQNEAISVLEQLATCAAKESRFDDAGFYYWKLSVLCLNMLNNETITKPVYQE
LLSRYDDFQRKADVYYVYNNIYRFLHEPFASHMPETYFNMARYLIHILQFGDIPEVSKAA
VLYTLAKHGRTLGAYKLTKQIYDRLQTLHMPSKMRDEVDLASITLNSGPMIDSEDISTMC
YRCSATNPLLNSLGNRCMNCKEPFIYSFINLEQLPIVEFIPEDNLSHEEVLSYLQSEPPS
YRNLKDEDINNIELSNEYSQTLKISHEQENGSLDQDPFMAKLLNSDLISESYSPVQLDIT
TLKAISFNEVIIVNNPPLKPRYYKSVLPDVSITQCIVCHKLFYTDDYELISLQQGYCPYC
HTVKE
NT seq 3618 nt   +upstreamnt  +downstreamnt
atggataccgcgcaagtttggtcgttcaaggtcaaaggaaaggatggtgttactaactgc
atatgggatctatgctacagtccagatggatcgcaacttattgtagcctctggtaactta
gtatgggtatacaaggcagataatggcagtctgattaagaacctgaaaggtcacaaggat
acggtttattgcgttgcatatgctcatgattcgagtatatttggaagcggatcagccgat
aagtgtgtaatcatctggaaatcgtctacgttagagggcttgctgaagtatatgcacact
gagtcaattcaatgtttggaatttaaccccgttaccgtgcttctagctagcactgggagt
acagattttggtttctggactatggatcaaaagtcggttgtaaaaaccaagatatcggct
cgtcctacatgttgcagttggatgtctgatggtcagtttttagctattggtctttataac
ggtgtgattagcattcggaataaggaaactgaggaagtcgttaaaattgaacgcccaggc
aatccaattacatggcaccttaaatggaatccatcgaaaaatggtcacggtgaaatatta
gcagttgttgactggaatcaaaagttatcgttttatcaattaaatggaagacaaactgga
aaagattatttattaggatatgatccatgtaatataacatggtttggtaataaatatgaa
tcattggcaatttgtggatccaataaaatgtgtcaattatataataatgaaggtatacgt
ttagcatgtattaataaacaacaaacatggatatggtgttgttgtacacgtaatggatat
aatcaaatagttgttggctgtcaagatggaacattggaaactgtacaacttctattagat
cctgtatatagctttcataaagatcgttatgcatatcgtgaatcgttaacggatgtagtt
gttcaacatttaataactgaacaaaaagttgtcaatatcttggtcccacaagggttcatt
tattgcccaaatatctcactgattcaacttccagaaaagattttaatctacgaatcatct
tctgatgatatgaaagacatgcattatagaattaatacaaaattattagaacaaattcat
tgtcaatatttaatcattattacaaatcatttaattgttggtcaaactaattgtttaaca
tgtataaattttaaggggataaaagaacgtgaatggattgtggatagcccagtgaactgt
attcgtattattggtggaccacccaataaggaaggtttactattgggtctgaaaaatgga
caagtagttcaaattattgtggataatacatttcctatacatttgacaaaaataatgaac
gaagtttattctgtggatattagcagaaatcgtgataaattagctatagtggatagtaat
aaaacaatgatcgtatactctttggaaaaacaagaaagtttatttcaagaaccaaatgtt
tccagtatttcatggagtacaactaataatgaattattagcttacactggtaatgattta
ttatttattaaaaatggacaatttccaagtcatcgccaatataataaaggtcaaacactt
aatttcacaggttcctttatttattgtttacatgagaataccataaatcgtgtagaaatc
tcattaagtcctgctgtttatcactatttgggaactggtcaattgaatgaagcctatcat
ctagcttgttttggactaactgaccaagactggaaagttattggacgaatggctttaaat
aaacttaatttaaaagtggcgaaatgtgcttatatacagttggatgatatacttatgctt
acttttattcaacaacttgaggaaagatataaacgtggtgaatggaataatcaagagtta
attaataaatcatccaatgttctaactattctaggtgatatttcagcttatttaggtcat
ttcaatgaagctgttgcttattatacacaagctaattctactaatataaatcataaaatc
attgatatgtatacagatttacgtcgttttaatgaagcacatgaaatgttgaaatctaat
aatgatatcaatgaacataaattattattagttaaaaatgctgattgggctaaatcaacg
aatgaatatagaacggcagttaaaatgtatatggacgcaggtgaattcataaaagctatt
gaattatctgatttacatggatggactgatattttgttagatataagtcgtcgtttggat
aaagatgatcatgaatatttggaacgttgtgcacgtagtttaactcgacttggtgaatat
gctttcgctgcagattgttatgctaaatatggtgatattgaaaatcagttgaatttatac
attgaatcacacaattgggaagaagcattcaatttagtagagaaacatcatgattataca
agaaaagtttatttaccatatgctaattggttagcagaaaatgataaatttgaagaagct
caaacagcatttatcaaagctggtttacaaaatgaagctatctcagtacttgaacaatta
gctacatgcgctgctaaagaatcacgttttgatgatgctggtttctattattggaaatta
tctgttttatgcttgaatatgttgaataatgaaacaattacaaaaccagtttatcaggaa
ttgttatctcgatatgatgactttcagagaaaagccgatgtttattatgtatataataat
atataccgttttctgcatgaaccatttgcttcacatatgcctgaaacctatttcaatatg
gcacgttatttaatacatattttacagtttggtgatataccggaagtttcaaaagctgca
gttttgtatactttagcaaaacatggtcgtacactaggtgcatacaagttgaccaaacaa
atatatgatcgattacaaacactgcatatgccatctaagatgcgtgatgaagtagattta
gctagtattaccttgaattctggaccgatgattgattctgaggatattagtactatgtgt
tatagatgttcagcaaccaatccactattgaatagtttgggcaatcgatgtatgaattgt
aaagaaccctttatttattcttttattaatcttgagcaattgccaatagttgagttcatt
ccagaagataatttatcacatgaagaagtactaagttatttacaaagtgaaccaccgtct
tacagaaatttgaaagatgaagatataaataatattgaattaagcaatgaatattcacaa
acacttaaaatatcccatgaacaagaaaatggatcactagatcaagatccattcatggct
aaattattaaattcagatcttatctctgaatcatattctcctgttcagttagatattact
acattgaaagcgatttctttcaatgaagtgataattgtcaataatcctccactaaagcca
cgttattacaaatctgttttacctgatgttagtattacacaatgtatcgtttgtcataag
ctattttacactgatgactatgaattaatctcattacaacaaggttattgtccatattgt
catacagtaaaagaataa

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