Schistosoma mansoni: Smp_208000
Help
Entry
Smp_208000 CDS
T01095
Name
(RefSeq) putative rab geranylgeranyl transferase alpha subunit
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
smm
Schistosoma mansoni
Pathway
smm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Smp_208000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_208000
Enzymes [BR:
smm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smp_208000
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
Smp_208000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS_C
IMS_HHH
IMS
IMS_HHH_1
SAM_BAF
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
29830886
NCBI-ProteinID:
XP_018650504
LinkDB
All DBs
Position
2:complement(<27745512..>27767777)
Genome browser
AA seq
601 aa
AA seq
DB search
MLTMDYPPFFSIHSSCRSRSKHPQSHNLNISCTNNQIPIDDNSESNSNSCPETDKSSVKL
SVPMIKPKYSDPELEVCIECGLLCKSGRRIFGLSAWEAVREMRFRVFCATRLTCSAGLGP
NTLIAKIASDWIKPCGQHEIANTSEAVDKFMQTMPVRKVPGIGHVTERRLDAFGIKTCAD
LIDKRGLLWHVSTKTSMIYYMRIALGHSDDRWLTNIKNNFDEKSNKSFGFIDNDSENSVP
SIQGQVELNRKSMSVERTFSDTSDENELMHRCEQLAQMLSTDLKEEHVKGQLITLKMKLD
TFEIRTRSQLLPDYTNHTEIINSFGRELLREEMVAFKSNPAVNKPLTLRLMGLRMSNLLP
VEMCPQIRQRSVEEAFMFAITSNNTSPEKKPSTISKTLLRTETSMKSHNTVSSPKSVEST
KNKLKKLTKSSQKNDKKKMVGCTSSSLITQWTKPAPLPTDNEVGSPSSSISLNLSLELSS
SSLASASSFNNNVGYFFKCPVCERDFRFSSEDKFNYHLDECLNRSAILEVVKETLTNQLS
ERDHCSTISQSNHLNSSPNDIGIRKPKLQKLESKQSENSNPSTSHGPLDKFIFNLPTVQF
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaactatggattaccccccatttttttctattcactctagttgtcggtcacgttct
aaacatccacaatctcataatttaaatattagctgcaccaataaccaaattcctatagat
gataattctgagagcaattctaattcctgtccagaaacagataaatcatctgttaagcta
tctgtacctatgataaaaccgaaatacagtgatcctgaattagaggtatgcattgaatgt
ggattactttgtaaatctggtcgtcgaatatttggtttatcagcttgggaagctgttcga
gaaatgcgatttcgtgtgttttgtgctacacgtcttacttgtagtgctggtcttggtccg
aatacattgattgcaaaaattgcctccgattggataaaaccatgtggacaacatgaaatc
gctaatacatcagaagctgtcgataaatttatgcaaactatgcctgtgagaaaagttcca
ggaattggacatgttacagaacgtcgactagatgcatttggaattaaaacatgtgctgat
ttaattgataaacgtggtttactctggcatgtaagcactaaaacatcaatgatttactac
atgcgtattgcattaggacattctgatgatcgttggttaactaatataaaaaataatttt
gatgaaaagtcaaacaaatcttttggatttattgataatgattcagaaaacagcgttcct
tctatacaaggtcaagtagaattgaatagaaaaagtatgagtgtagaaagaacattttca
gacacatccgatgaaaatgaattaatgcatcgttgtgaacaacttgctcaaatgttatca
actgatttaaaagaggaacatgtcaaaggtcagttaatcacactcaaaatgaaattagat
acatttgaaattcgaacaagatcacaactcctaccagattacactaatcatacagagatt
attaattcgttcggccgtgaattattgcgtgaagaaatggtagcctttaaatcgaatcca
gctgtgaataaaccacttactttacgtcttatgggcttacgcatgtccaatttattacca
gtagaaatgtgtccacaaattcgtcagcgtagtgttgaggaagcttttatgtttgcaata
acaagcaataatactagtcctgaaaaaaaacccagtacaatctctaaaactttgttacgc
acagaaacatctatgaaatcgcataacacggtatcttcacctaaatcagttgaatcaaca
aaaaataaactgaagaagttaacaaaatctagtcagaaaaatgataaaaagaaaatggtc
ggttgtacttcttcttcattgattacacaatggactaaacctgctccattacctactgat
aatgaagttggttcaccatcttcgtccatctcattaaatttatcacttgaactgtcgtca
tcctcgttagcatcagcctcatcttttaataacaatgttggttacttttttaaatgtccc
gtctgtgaaagagattttcgattttcttcagaagacaagttcaattatcatttggacgag
tgtttaaatagatcagctattttagaagtagtcaaagaaactttaacaaatcaattatct
gaaagagatcattgttcaactatatcacagtctaatcatttaaattcatcaccaaatgat
attggtattcggaagccaaaattacaaaaacttgaaagcaaacaatccgaaaacagtaac
ccatcaactagtcatggacctcttgataaatttatttttaatttacctactgtacagttt
gattaa
DBGET
integrated database retrieval system
