KEGG   Selaginella moellendorffii: SELMODRAFT_107803
Entry
SELMODRAFT_107803 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_107803
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_107803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_107803
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_107803
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_107803
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SELMODRAFT_107803
Spliceosome [BR:smo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SELMODRAFT_107803
 Complex C
  U2 snRNP components
    SELMODRAFT_107803
SSDB
Motif
Pfam: LSM TIG_SUH
Other DBs
NCBI-GeneID: 9656850
NCBI-ProteinID: XP_002977912
JGI: 107803
UniProt: D8S3E9
LinkDB
Position
Unknown
AA seq 97 aa
MASEEDGAVKEPLDLIRLSLDERIYVKLRADRELRGKLHAYDQHLNMILGEVEEVVTTTE
IDDETYEEIVKTTKRQVPYLFVRGDGVILVSPPLRSA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggccagtgaagaggacggcgctgtcaaggagccgcttgatctcatccggctcagcctg
gacgagcggatctacgtcaagctgcgcgccgatagagagctccgcggcaagctacatgcc
tatgaccagcatttaaacatgatcctgggagaagtggaggaggtcgtgaccaccacggag
attgacgacgagacttacgaggagattgtcaagacgacaaagcgacaggttccatacttg
tttgtgaggggcgatggagtgatcttggtatcgcctcccttgagaagtgcgtaa

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