Selaginella moellendorffii: SELMODRAFT_235993
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Entry
SELMODRAFT_235993 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00130
Ubiquinone and other terpenoid-quinone biosynthesis
smo00940
Phenylpropanoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SELMODRAFT_235993
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
SELMODRAFT_235993
Enzymes [BR:
smo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
SELMODRAFT_235993
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9631000
NCBI-ProteinID:
XP_002990331
JGI:
235993
UniProt:
D8T3X3
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All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MGVTSKRKVTSAAYDRQSGIYASDRCDIVFPEGELLDFATFVSSKNILNPANNVALMDGV
TGRELTFDQVMEETVSLATCLHHLGIEQGDVVMLLAPNSIYYPLAVMAIARIGAVVATPS
PMGSAKDVEFQARLANAKMVITTSELLFKTRGLGLETIVMDDDGSFSLAEDPGKAVKVRA
SSTVQPRIHRDDPAAILYSSGTTGMSKAVVLSHANVVAQILQLAREELYESALAGRKLSY
DVPLCALPMSHIFGLVAVTLKQLYLGNRLVILPGFELRTMLAAVESYRISHIYVVPPVII
TLAKFLQKTTTMHDFTSLRASLCGAAPLGEDLVLTLSHLLPNAFFFQLYGITEATGALTL
NDTVASGNTASAGTLLSNVEAKVLDVRSGAALPPNCQGELFLRSPTTMLGYISNPEATKL
SIISDDWLRTGDLVYFDDAENLFVVDRIKELIKYKTLQVAPAELEALILTHPLVLDAAVV
ASKDEEAGEIPVAFVVPSADGELTEDEVRVFVARNVAAHKRVRRVTFIDAIPKTPSGKIL
RKDLALKA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcacgagtaaaagaaaagtcaccagcgcagcttacgatcgccagtctgggatc
tacgccagtgaccgctgtgatatcgtgtttccggagggcgagctgctggactttgcaaca
ttcgtttcatcgaaaaacatcttaaatccggccaacaatgtcgcgctgatggatggagtc
acgggacgagagcttacatttgatcaagtcatggaagaaacagtatctctggcaacttgt
ctccatcacttggggatcgagcagggggatgttgtgatgctactggctccaaactcgata
tactatccgcttgcagtgatggccattgccaggattggagctgtggttgctactcccagt
ccaatgggatctgctaaagacgtcgagttccaagcaaggcttgcaaacgcgaagatggtg
atcacaactagcgagctcttgttcaagacaagaggactgggcctggaaactatagtcatg
gatgacgatggatcgttttctctagcagaagatcccggaaaggcagtgaaagtacgagct
tcctcgactgtccagccacgaattcacagagacgatccagcagctattttgtactcgtcg
ggaacgaccgggatgagcaaggcagtggtgctgtctcacgccaacgtcgtcgcgcaaatc
ttgcagcttgctcgcgaagaattatatgagagtgctcttgccggacgaaaactttcatac
gacgttcctctttgcgccttgccaatgtcacacatctttggactggttgcagtgactttg
aagcagctctaccttgggaaccggctagtgatccttccgggctttgagctgcgtacgatg
ctagcggcggtcgaaagctaccggatctcgcacatctatgtcgttcctccggtgatcatc
actctcgcgaagtttttgcaaaagaccacaacgatgcacgactttacatccttgcgagct
agtttatgtggtgcagccccactgggagaggacctggtgcttactctaagtcatttactt
ccaaacgcatttttctttcagctttatggcatcaccgaagcgacaggggctctcaccttg
aacgacacagtcgcaagtggtaacacagcatcagctggaacccttctctccaatgtggaa
gccaaagttcttgacgttcgtagcggtgccgcgctgcctccaaactgccagggagaattg
tttttacgctctccgacaacgatgctcggctacattagcaatccggaggcaacgaagctt
agcataatcagcgatgattggctgagaactggagatcttgtttacttcgacgacgcggag
aacttgttcgtggtggacaggatcaaagagctcatcaagtacaagacccttcaggtcgcc
ccggctgagctagaagcattgatattaacccatcctcttgtcttggacgctgctgtggta
gcgtccaaagacgaggaggccggggagattcccgtggcatttgtcgttcctagcgctgat
ggagagctcacggaggacgaagtgagagttttcgtcgctagaaatgtggctgctcacaag
agagtacgaagagtgactttcatcgatgcgattccaaagacgccgtcggggaagattttg
cgaaaggatctggcattaaaggcgtga
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