KEGG   Selaginella moellendorffii: SELMODRAFT_269625
Entry
SELMODRAFT_269625 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
smo  Selaginella moellendorffii
Pathway
smo03420  Nucleotide excision repair
smo04120  Ubiquitin mediated proteolysis
smo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SELMODRAFT_269625
   04120 Ubiquitin mediated proteolysis
    SELMODRAFT_269625
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_269625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_269625
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_269625
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     SELMODRAFT_269625
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   SELMODRAFT_269625
  Multi subunit type E3
   SCF complex
    Ring finger protein
     SELMODRAFT_269625
   Cul2 complex
     SELMODRAFT_269625
   Cul3 complex
     SELMODRAFT_269625
   Cul4 complex
     SELMODRAFT_269625
   Cul7 complex
     SELMODRAFT_269625
   Cul8 complex
     SELMODRAFT_269625
   Cul9 complex
     SELMODRAFT_269625
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      SELMODRAFT_269625
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      SELMODRAFT_269625
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 9647640
NCBI-ProteinID: XP_002990204
JGI: 269625
UniProt: D8T3M3
LinkDB
Position
Unknown
AA seq 112 aa
MMDVAGPSGEGSSSGASSSTKRSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIEC
QANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGR
NT seq 339 nt   +upstreamnt  +downstreamnt
atgatggatgtggccgggccatcgggtgagggctccagcagcggcgccagtagctccacc
aagcgctctaagcgcttcgagatcaagaagtggaacgctgtggcgctttgggcatgggac
attgtggtggacaactgcgcgatttgccggaatcacatcatggatctgtgcatcgagtgc
caggcaaaccaggccagcgctaccagcgaagaatgcaccgttgcctggggcgtgtgcaac
catgcgtttcacttccactgcatcagccgctggctaaagacgcgccaagtctgccctctc
gataacagcgagtgggagttccagaaatacggtcgctag

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