Selaginella moellendorffii: SELMODRAFT_269937
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Entry
SELMODRAFT_269937 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03420
Nucleotide excision repair
smo04120
Ubiquitin mediated proteolysis
smo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_269937
04120 Ubiquitin mediated proteolysis
SELMODRAFT_269937
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_269937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_269937
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_269937
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
SELMODRAFT_269937
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
SELMODRAFT_269937
Multi subunit type E3
SCF complex
Ring finger protein
SELMODRAFT_269937
Cul2 complex
SELMODRAFT_269937
Cul3 complex
SELMODRAFT_269937
Cul4 complex
SELMODRAFT_269937
Cul7 complex
SELMODRAFT_269937
Cul8 complex
SELMODRAFT_269937
Cul9 complex
SELMODRAFT_269937
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SELMODRAFT_269937
TCR (transcription coupled repair) factors
Cul4-CSA complex
SELMODRAFT_269937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
9629202
NCBI-ProteinID:
XP_002992487
JGI:
269937
UniProt:
D8TA94
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MASVDMMDVAGPSGEGSSSGASSSAKRSKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGR
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtcgacatgatggatgtggccgggccatcgggcgagggctccagcagcggc
gcgagtagctccgccaagcgctctaagcgcttcgagatcaagaagtggaacgctgtggcg
ctttgggcatgggacattgtggtggacaactgcgcgatttgccggaatcacatcatggat
ctgtgcatcgagtgccaggcaaaccaggccagcgccacgagcgaagaatgcaccgttgcc
tggggcgtgtgcaaccatgcgtttcacttccactgcatcagccgctggctaaagactcgc
caagtctgccctctcgataacagcgagtgggagttccagaaatacggtcgctag
DBGET
integrated database retrieval system