Selaginella moellendorffii: SELMODRAFT_418725
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Entry
SELMODRAFT_418725 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_418725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_418725
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_418725
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
SELMODRAFT_418725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf_RING-like
Med9
Motif
Other DBs
NCBI-GeneID:
9659833
NCBI-ProteinID:
XP_002978935
JGI:
418725
UniProt:
D8S6Y7
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MEEDDESSDSSFSTVSSSAPLTRNASGIGCSSIFTRIRGGRGRQHRQHHRARGGGDRAGA
VRIGSSPYKLQERILSRQKGDARNRSGLGQLLSPDRLNVSVARNIFPGDNVVDVQKEQAS
SFRRDRMSQKLCEASGTKIEQPHKSGTLSSAIAEIFRCFICLGKLMDAQLCPCCSKLVCM
LCIKRWLTDQKPECPHCRASLSVSQLVGCKFISEITTEVEKIHGNFDEDAPPEKICPAHG
SPLSYFCTTCSTAVCSDCAILAESHQNHSFERLNVTYGRHSKKLHVEASALRSRLKDLYD
MLASVDNDIEAVLKAKDDQATEIEAAFKRMRAKLEEQLKCKLLTLLAQKGAVSQEVELLE
TILRQLDFQLTTSSKSDLIAHEPTITCIIQDLHKKINLELRRDPVSSDFVSEVIPPFEHG
ELVLKNFRKYLHAKPSKSNDSSSTTDSTSDIVYSAPISAAGITWRLKLYPNGSGSSKGSH
ISAFLEEGACWGYYQFFKIDDLENEGYLLPGEDTLTLSFYVRAQTFLQQCLDLRRALSSC
QAERQEAVTQPNPKAARDTFSRLDKILLSGVPTSDAPQKSEVDDRSDAPSMALSQASVQP
ESREKCELWLKSRDNLFQMPASRSKFYGRRGHRHRKSNRAFDVVSLAKRTRMATLPCAIL
EGNDESVNT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgacgagagctccgattccagcttctcgaccgtgtcatcgtcggcgccg
ctgacaaggaatgcaagcggcattggctgctcctcgatctttaccaggattcgaggaggt
cgaggtaggcagcatcgccagcatcatcgcgccaggggcggcggcgatcgagctggtgct
gtcaggatcggatcgagcccttacaaattgcaggagaggattctgtccaggcagaaggga
gacgcgaggaatcgatcggggctgggccaattgctctcgccggatcgtctcaacgtgtct
gttgctcgcaatatttttcctggcgacaatgtggtggatgtacagaaggaacaggccagc
tcctttcggcgagatagaatgtcgcagaaactttgcgaagcgtcgggaaccaagatcgag
cagccccacaaatctggaactctatcatcagccatcgcggaaatctttcgctgtttcatc
tgcttgggaaagcttatggatgctcaactttgtccatgctgctctaagctggtgtgcatg
ctatgtatcaaacgctggttaaccgatcagaagcccgagtgccctcactgccgtgcctcg
ctctcggtctcgcaacttgtaggctgcaaattcatttccgagattacgacggaagtggag
aaaatacacgggaattttgacgaggatgctccaccagagaagatttgcccagctcatggc
agtccactttcgtatttctgcaccacatgctcgactgcagtgtgctccgactgcgccatc
ctggccgagagccaccaaaaccactcgtttgaacgcctaaatgtgacctatggaaggcat
tccaaaaaattgcatgtcgaggcatcagctctacgttcacgtcttaaagatttgtatgat
atgctggcgtcggttgacaatgacattgaagctgtcttgaaggccaaagatgatcaagcg
actgagattgaagcggctttcaaaagaatgcgggcgaagctcgaagaacagctcaaatgc
aagctgctgacactattggcacagaagggtgctgtttctcaagaggtggagttgttagag
accattttgcgtcaacttgattttcaattaactacatcgtccaagagcgatctcatcgct
catgaaccgacaattacatgtattatacaggacttgcacaagaaaatcaatcttgaatta
aggcgggaccctgtttcttcagattttgtttccgaggttattcctccgtttgagcacggg
gagcttgttcttaagaacttcagaaagtatttgcatgcgaaaccaagcaagagcaacgat
tcttctagtacaactgactccacaagcgacatcgtttacagtgcgccgatttctgccgcc
gggattacctggcgcctaaagctgtatccaaatggtagtggttcatcgaagggaagccac
atttctgcatttcttgaggaaggtgcatgctgggggtactatcaatttttcaagattgat
gaccttgaaaacgaagggtaccttcttccgggggaagatacacttacgctgagcttttac
gtccgagctcaaacgttcttgcaacaatgcctggatctgagaagagcactgtcatcgtgt
caagcagaacggcaggaagcggtgacgcagcccaacccaaaggctgccagggacacattc
agccgcttggacaagatactcctcagcggtgttccaacatcagacgctccccagaagtct
gaggtggacgaccgcagcgacgccccatcaatggcgctgtcccaggcatcggtgcagcca
gagagcagggagaagtgtgagctgtggctcaagagccgagacaacttgttccagatgcca
gctagtaggagcaagttttatggtcgcaggggccacaggcacaggaagagcaacagggcc
ttcgatgtcgtttcgcttgccaagcgcaccagaatggcgacgctgccttgcgccatactg
gaaggaaacgacgagagcgtcaatacgtga
DBGET
integrated database retrieval system
