Selaginella moellendorffii: SELMODRAFT_429827
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Entry
SELMODRAFT_429827 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_429827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_429827
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_429827
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
SELMODRAFT_429827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
zf-B_box
zf-C3HC4_3
zf_RING-like
Med9
Motif
Other DBs
NCBI-GeneID:
9639647
NCBI-ProteinID:
XP_002991495
JGI:
429827
UniProt:
D8T7F6
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MEEDDESSDSSFSTLSSSAPLTRNASGIGCSSIFTRIRGGRGRQHRQHHRVRGGADRAGA
VRIGSSPYKSQERILSRQKGDARNRSGLGQLLSPDRLNVSVARNIFPGDNVVDEQASSFR
RDRMSQKLCEASGTKIEQPHKSGTLSSAIAEIFRCFICLGKLMDAQLCPCCSKLVCMLCI
KRWLTDQKPECPHCRASLSVSQLVGCKFISEITTEVEKIHGNFDEDAPPEKICPAHGSPL
SYFCTTCSTAVCSDCAILAESHQNHSFERLNVTYGRHSKKLHVEASALRSRLKDLYDMLA
SVDNDIEAVLKAKDDQATEIEAAFKRMRAKLEEQLKCKLLTLLAQKGTVSQEVELLETIL
RQLDFQLTTSSKSDLIAHEPTITCIIQDLHKKINLELRRDPVSSDFVSEVIPPFEHGELV
LENFRKYLHAKPSESNDSSSTTDSTSDIVYSAPISAAGITWRLKVYPNGSGSSKGSHISA
FLEEGACWGYYQFFKIDDLENEGYLLPGEDTLTLSFYVRAQTFLQQCLDLRRALSSCQAE
RQEAVTQVAVLRRAFASSIWQQRRRKNRSVSELEDDQGSIKQVLAGAVSSLLPTFEQPNP
KAARDAFSRLDKILLSGVPTSDAPQKSEPQVVVDDRSDAPSMALSQASVQPESREKCELW
LKSRDNLFQMPASRSKFYGRRGPRYRKSNRAFDVVSLAKRTRMATLPCAIPEGNDESVNT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgatgagagctccgattccagcttctcgaccctgtcgtcttcggcgccg
ctgacaaggaatgcgagcggcattggctgctcctcgatctttaccaggattcgaggaggt
cgaggtaggcagcatcgccagcatcatcgcgtcaggggcggcgccgatcgagctggtgct
gtcaggatcggatcgagcccttacaaatcgcaggagaggattctttccaggcagaaggga
gatgcgaggaatcgatcggggctgggccaattgctctcgccggatcgtctcaacgtgtct
gttgctcgcaatatttttcctggcgacaatgtggtggatgaacaggccagctcctttcgg
cgagatagaatgtcgcagaaactttgcgaagcgtcgggaaccaagatcgagcagccccac
aaatctggaactctatcatcagccatcgcggaaatctttcgctgtttcatctgcttggga
aagcttatggatgctcaactttgtccatgctgctctaagctggtgtgcatgctatgtatc
aaacgctggttaaccgatcagaagcccgagtgccctcactgccgtgcctcgctctcggtc
tcgcaacttgtaggctgcaaattcatttccgagattacgacggaagtggagaaaatacac
gggaattttgacgaggatgctccaccagagaagatttgcccagctcatggcagtccactt
tcgtatttctgcaccacatgctcgaccgcagtgtgctccgactgcgccatcctggccgag
agccaccaaaaccactcgtttgaacgcctaaatgtgacctatggaaggcattccaaaaaa
ttgcatgtcgaggcatcagctctacgttcacgtcttaaagatttgtatgatatgctggcg
tcggttgacaatgacattgaagctgtcttgaaggccaaagatgatcaagcgactgagatt
gaagcggctttcaaaagaatgcgggcgaagctcgaagaacagctcaaatgcaagctgctg
acactattggcacagaagggtactgtttctcaagaggtggagttgttagagaccattttg
cgtcaacttgattttcaattaactacatcgtctaagagcgatctcatcgctcatgaaccg
acaattacatgtattatacaggacttgcacaagaaaatcaatcttgaattaaggcgggac
cctgtctcttcagattttgtttccgaggttattcctccgtttgagcacggggagcttgtt
cttgagaacttcagaaagtatttgcatgcgaaaccaagcgagagcaacgattcttctagt
acaactgactccacaagcgacatcgtttacagtgcgccgatttctgccgccgggattacc
tggcgcctaaaggtgtatccaaatggtagtggttcatcgaagggaagccacatttctgca
tttcttgaggaaggtgcatgctgggggtactatcaatttttcaagattgatgaccttgaa
aacgaagggtaccttcttccgggggaagatacacttacgttgagcttttacgtccgagct
caaacgttcttgcaacaatgcctggatctgagaagagcactgtcatcgtgtcaagcagaa
cggcaggaggcggtgacacaggtggcggtcctgcggcgagctttcgcatcgtcaatctgg
cagcagcgccggaggaagaaccgcagcgtctccgagctggaagacgaccaaggatcgata
aagcaggtcctggcgggtgcagtgtcaagcctcttgccaacttttgaacagcccaaccca
aaggctgccagggacgcattcagccgcttggacaagatactcctcagtggtgttccaact
tcagacgctccccagaagtctgagccgcaggtggtggtggacgaccgcagcgacgcccca
tcaatggcgctgtcccaggcatcggtgcagccagagagcagggagaagtgtgagctgtgg
ctcaagagccgagacaacttgttccagatgccagctagtaggagcaagttttatggtcgc
aggggccccaggtacaggaagagcaacagggccttcgatgtcgtttcgcttgccaagcgc
accagaatggcgacgctgccttgcgccataccggaaggaaacgacgagagcgtcaatacg
tga
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integrated database retrieval system