Selaginella moellendorffii: SELMODRAFT_432347
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Entry
SELMODRAFT_432347 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_432347
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_432347
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_432347
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
SELMODRAFT_432347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
CotJA
Motif
Other DBs
NCBI-GeneID:
9641028
NCBI-ProteinID:
XP_002994428
JGI:
432347
UniProt:
D8TFQ7
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MESSDRMEAPAMIPRKRRGFRRPSLNPDSTARKKLKFKDQVSLDIVSADFLLPNGEVVSG
VEIKRSSYENVDALLDDLAERPADGPDGVRKLDWSKEMWVEDESGERIDDIGKLFSEGAR
RKILVQDGNKRTVHRYWWNVTPEVEMLERLPDGYTLETALADHVDNALQAVWENQPGFRR
LVSVEIDQDTITIFDTGMGMDATAQDSIEKWGTVGASNHRNVHRQGIGGDPPFLKPYLGK
YGAGGVAAALFLGLSVEVRSKTRKSKRVVSLKFSKAAMETGGGSRIWRTRGGFHLMTEEE
AKKSPHGSFTCVKISDLKSSACIEGQRQYWVLKQVKQMLKDIYSLYIQYDGVGSSSGTMT
PVEFEVNGENLLEELGGEITSCNQHSSPGEPFILDLRLVSASSEEAHARLTCQYFPSIKG
REKLSDVIEDLKSCRKDFKENFDTFPRVGLRWLGRLLPNARWNSMPFMDAASKKSVLRWI
KRVKVFAGKRYTFYPRSGFHPTPSKTKLVEDHPFTTALKQLGSMEEDTVPADVKTTIYFQ
SKVLEPPQVIAEFANWTKRMHEEFDREVEFGDDPTYVIGQSELKRLLKVEKEVLCFHKCL
KDPRGDWRAGDMVKLQKELYKGKQNFYGVIEWFFCDGIDEQYGEVKMVCRPVELLTTEEE
SKIETAQICSFKLNSEWHTQENRLKGKLPAFVELLNNDDRRVFGGKHLHRSNLTFEAGYV
LQIDSFLVVVRPQQGTGASCKQAAIVADPHRMKAEVHFSSKDRDETKMQGCYYAEVEARN
GIKGIYAFAAGTIFPDLCKAGKYKVEFSIDGHPDLKPAVWEVNIKSLEFVSRWHVDTKAC
TGITLEELVTQNFTVQGFDTYDNLVPFSQPCPNLCMVLETLESTRLSTVSLGRESVSFSQ
KKDKMNVGNFIVRGCILPAHDARLCFYVGNQKLGHWRCQVYPGKLARLELVNSSLELAPS
GSMFCVKQPLDPDSYFPCMVFKGFDEWGNSVSQGTRMRLQLSGVHLSQQEQPKRSYIGRE
VTGLNVHVVDEAGNVDTAIGGTISMSWDKDICYVVNKGQCQLRGLTVPKTPGLWEGRAWH
SDYQLMSLAFEIQVELAAACKLVCEAQVIAGGCGEEIALKFEARDELNLPGFLSNEIVEQ
MEVEVFPEEDYLTDENVLLSRRISSTEDMKYSLRVVLDGKEGFYVVTLKNAMQALSWRVY
LGCGDVHRLVPFCGKRNELLKALMTADAGRRFS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagcgatagaatggaagcgccagcgatgatcccgcgcaagaggcgaggcttt
cgcaggccgtcgctcaatcccgactccacggctcgcaagaagctcaagttcaaggatcag
gtgtcgctggatatagtttcggcagatttcctgctaccaaatggcgaggttgtgagcggc
gtggagatcaagagatcttcctacgaaaatgtggatgccttgctcgacgatcttgcagag
cggcctgcagatggtcccgatggggtgcggaagctcgattggagcaaggaaatgtgggtc
gaggatgagagtggcgaaagaatcgatgatatcgggaagcttttctccgagggcgcgcgg
aggaagatccttgtccaggatgggaacaagcgcacggttcaccggtattggtggaacgtg
acaccagaagttgaaatgctagagaggctcccggacggatacacgctagagacagctcta
gccgatcatgtggacaatgcactgcaagcagtgtgggagaatcaaccaggtttcaggcga
ctcgtcagcgtggagattgatcaagataccattacaatctttgatacgggaatgggaatg
gatgccacggctcaagattcaatcgagaaatggggaaccgtgggagcttccaatcaccgg
aatgttcatcgacagggaattggcggcgatcctccatttctcaagccttatcttgggaag
tacggtgctggaggggtcgctgctgctctcttccttggcttgtctgtggaagttcgctcg
aagacgaggaagtccaagcgagtggtcagcctcaaattcagcaaagctgcaatggaaaca
ggaggaggcagtcggatttggagaacccgcggaggctttcatctgatgactgaggaggag
gctaagaagtcacctcacggaagttttacttgtgtgaagatatctgacctgaaatcttct
gcgtgtatcgaaggacaacggcagtactgggtcttgaagcaagtgaagcaaatgctcaaa
gacatatattctctgtatatccagtacgatggtgttgggagctcgagtggaactatgact
cctgttgagtttgaggtgaacggagagaatttgctggaggagcttggcggcgagattaca
agctgcaaccagcactcttcccctggagaaccgtttattctagatctgcgccttgtttct
gcgtcttcggaggaagcccatgcacgtttgacatgccagtactttccaagcatcaaggga
agggaaaagctgagtgacgtcattgaagatctaaagagttgcagaaaagacttcaaggaa
aacttcgacacatttcccagggtgggactgagatggttgggacgacttctgccgaatgca
agatggaatagcatgccgtttatggatgcagcttctaaaaagagtgtgctacgctggata
aagagggtgaaagtgtttgcaggcaagagatacacattctatcctcgcagtgggttccat
ccaaccccaagcaagacgaaacttgtggaggatcatccttttacgactgcgttaaagcaa
cttggcagcatggaagaggatacagtcccagcagacgtgaaaacaacgatatactttcaa
agcaaggtgttggagcctcctcaggtcattgccgaatttgcaaactggacgaagagaatg
catgaagaatttgaccgggaggtcgaatttggagacgatcccacatacgtcattggccaa
agtgaattgaaaaggcttctaaaggtcgaaaaagaagttctctgttttcacaagtgcctc
aaagatccgcgtggggactggagagcgggcgatatggtgaagctacagaaagagctatac
aaaggcaagcaaaatttctacggtgtcatcgagtggttcttctgcgatggaatcgacgaa
caatacggggaagtgaagatggtttgcaggcccgtggagctactgactacggaagaagag
agcaagattgagacggcacagatttgcagcttcaagctcaacagtgagtggcatacacag
gagaatcggctgaagggaaagctgccggcattcgtagagcttctcaacaacgacgacagg
cgagtgtttggggggaaacatctgcatcggagtaacctcacgttcgaagcgggatacgtg
ctccaaatcgactcgtttctggtcgtggtgcgtccacagcaaggcactggagcgagttgc
aagcaagcggcgattgttgcagacccccaccggatgaaggcggaagtgcatttctcgtcg
aaagatcgtgacgagacgaagatgcaagggtgctactacgcggaggttgaagccagaaac
ggtatcaagggaatctatgccttcgctgcgggcacaatctttccagatctttgcaaggct
gggaagtacaaggtggagttctcgattgatgggcatccggaccttaagccagcagtttgg
gaggtgaatatcaaatccttggagttcgtttccagatggcatgttgataccaaggcatgc
accgggattaccttggaggagctagtaacgcagaactttactgttcagggatttgacacc
tacgacaatctggtgccattctcacagccttgtccgaatttgtgcatggttctcgagaca
ttggagagcacgaggcttagtacagtttcgcttggacgtgagagcgtgagcttttcccaa
aagaaggacaaaatgaatgtcggaaacttcatagttcggggctgcatactgccggctcac
gacgctcgtctatgcttctacgttggaaaccagaagcttggacactggagatgtcaagtt
tatcctggcaagcttgcacgactggagcttgtgaatagctctctcgagctcgctccttct
ggatcgatgttttgcgtcaagcaaccactggatcccgacagttacttcccgtgcatggtg
ttcaagggattcgatgaatggggaaactccgttagccagggaactcggatgcgtctccag
ctatctggcgtacacctctcacagcaagaacaaccaaaaagatcttacattggacgggaa
gttaccggactcaacgttcatgttgtggacgaagctggtaacgtcgacacagcaatagga
ggcacaatctcaatgagctgggacaaagacatatgctatgtcgtcaacaagggacagtgt
cagctaaggggactcactgtgccaaagactcctggattgtgggaaggacgagcatggcac
tcggactatcaacttatgagcttagctttcgagattcaagttgaactggcggctgcttgt
aaacttgtttgtgaagcacaagtaattgccggaggctgcggggaagaaatagctctcaag
tttgaagcacgcgacgagctcaaccttcctggatttctgagcaatgaaatcgtcgaacag
atggaagtggaggtgtttcccgaggaagactacctcaccgatgagaatgtgctgctcagc
agaagaatttcaagtacagaagacatgaagtacagcctcagggttgttctcgacggaaaa
gaaggcttctacgtcgtcacgttgaagaacgctatgcaagctttgagctggagagtgtat
cttggctgtggagacgttcacagattggtcccattctgtggaaagcgtaacgagctgctc
aaagctctcatgacagctgatgcgggccgccggttctcg
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