Selaginella moellendorffii: SELMODRAFT_437676
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Entry
SELMODRAFT_437676 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SELMODRAFT_437676
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smo01007
]
SELMODRAFT_437676
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_437676
Enzymes [BR:
smo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
SELMODRAFT_437676
Amino acid related enzymes [BR:
smo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SELMODRAFT_437676
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SELMODRAFT_437676
Prokaryotic type
Other AARSs
SELMODRAFT_437676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Ovate
tRNA-synt_1g
LTP_2
zf-FPG_IleRS
Tryp_alpha_amyl
tRNA-synt_1_2
tRNA-synt_1e
Prolamin_like
Motif
Other DBs
NCBI-GeneID:
9632784
NCBI-ProteinID:
XP_002960625
JGI:
437676
UniProt:
D8QNT8
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MLSRIFVTGGIMLLAIAIATDGAAVDSPPPPSSCDTARAIEALQDCRAAVDAKTGTGKPS
AACCEELKKVGKICLCAIIKEPPRGVEIEKMRKGFVLSVSCEAVGVPAFFFSRGLRERSS
GAMLGLHSFPRSPVLAAAKNAGKQPDSRYKGTIELPQTKFSLKANSVTREPEIQRFWEQK
QLLETITQKNQGEPFTLHDGPPYANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWD
CHGLPIELKVLQSIDAEARMKLSPIELRKKAAEFALKTVDQQRSSFQRYGVWGSWNSPYL
TLQPAYEAAQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEAELEYPEGHTSRSMYAVF
KMTFASDKFPKELEYLLSSLGVAIWTTTPWTIPGNTGVAVNDKLMYSVVEVVFNNDDSSL
GGKKSTKAGRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQLVVKGSCTGSALEFCRYKH
PLENREGVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQKYGLPMLSPVDDNGNFTDEA
NEFAGMSVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDSRIVHKYPYDWRTKKP
TIFRATEQWFASVEGFMPLALAAIKNVDWIPSQGENRITSMVSGRKEWCISRQRAWGVPI
PVFYHVDTGEPLLNEQTISHVQAIIAQQGSDAWWSLTTEDLLPDTYKAKASNYRKGTDTM
DVWFDSGTSWASVLGTKRWPADVYLEGSDQHRGWFQSSLLTSVATKGVAPYRQVLTHGFV
LDEKNVKMSKSLGNVVDPRSVIEGGKNQKEQPAYGADVLRLWVASVDYTGDVAIGPQILK
QTADVYRKLRGTLRYLLSNLHDWKPELEIEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQ
FGKFFQSVQRYAVLDLSNFYLDISKDRLYVGGTDSFTRRSCQAVLASLLLYLARGISPVV
PHLAEDAWQHLPFSYILPDGSKAESVFEAGWPEVDPRWRTISDRDKKLWSLLLELRVEVN
KVLESARMGKLIGANLDAKVCLHLGGEDDALLHSTLQAMAGSEDGTVDKLHVIFLTSQVE
VVDCEDADCAYTGSCKLEGSGGRAWIGVKRAEGQKCERCWKYSPAVGSFTLHSTLCERCY
KIRRGRGEEDEQLGAKGNEEQGRGVESSIDACVWTFVGSPNLEWHCRRVDCAPHFTGDGS
RAMGRRRLRFKFTNVISRVFLLRAHRVKPVAPSSVVAPAASKKSSSSFTSDSNREEEPEE
ERSLIAPAPAAPAPAKAKKKNRKPVFGYSCCSREEAIVRENCQYKRVKGLSKKPVGAASS
RAAPMVVASRQEEEMWEREGLWSVIAAVDSGKVVKKKVVLKKRKKSQSSPRLLRAPANSE
ISAMEEQVLIVGQAARVTSDPSSSERERKGSSTHTFRLSTSSGDASLGPEALAWDKEHSL
FASDDSSAPGSSKLVHRATTLEDEQRHEAIEEVGLKNHAGQTPRPKKSSSSSSASTSGSS
GGGTRGHHHRHHLHHHHHHHHHNSSFHLSRNHASGNKMTGALSEFDELGLLLSSSSKMPP
PPPRCDGKRISSASSLESSAKFWEDGREVASKVLPEFPRHKVGAESAPALDDHARTKKKK
KPKDLVRGKVRESVPVMLVSSNPYEDFRQSMVQMIFEKRLNKAADLEELLECYLYLNPPG
FHEVIVQVFTDLWLQALSTENQQQQNI
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgctaagcagaatctttgtgactggagggatcatgctgctcgccatcgcgatcgcgacg
gatggagctgccgtggattcgcctcctcctccttcgtcgtgcgataccgccagggcgatc
gaggcgctccaagattgccgcgcagccgtggatgcgaagaccgggacgggcaagcccagc
gctgcgtgttgcgaggagctcaagaaggtcggcaagatctgcctgtgcgcgatcatcaag
gagccacccagaggagtggaaatcgagaaaatgaggaagggttttgtgttatccgtgtca
tgtgaagctgtaggcgttccggcgttcttcttctctcgtggattgcgggagcgctcttcc
ggggcgatgcttggcttacattctttcccacgatcgccagtgctcgcggccgcgaagaat
gcagggaagcaaccggattcacgctacaaggggactatcgaattgcctcagactaaattc
agtctcaaggcaaattccgtgacgagagagccagagattcagagattttgggagcaaaag
caattgctcgagacgattacacagaaaaatcaaggggaaccatttacgcttcacgatggt
cctccatacgctaatggcgatttgcatatgggacacgccttgaataaaatcttgaaggac
ttcatcaaccgctaccaactacttcaaggacgaaagattttctacgttcctggctgggac
tgtcatggtctgcctatcgaactcaaagtgctgcaatccatcgacgccgaggcgcgcatg
aaactctctccgattgagctaagaaaaaaggcggcggagtttgccttgaaaacagttgat
cagcagcgcagctctttccagagatatggagtctggggttcatggaacagtccctatctc
acactgcaacccgcatacgaagctgctcagatcggtgtattttgtcaaatggttttaaat
ggatacatttataggggtcgtaaacccgttcattggagtccgtcgtctggtacagctctt
gctgaagctgagctcgagtatcctgaaggtcacacttctcgaagcatgtacgctgtgttt
aagatgacatttgcatcagacaagtttcccaaagaacttgaatatcttctatcaagcctg
ggtgtcgctatttggactacaactccttggactattcccgggaatacgggtgttgctgtc
aatgataaactcatgtactcagttgtggaagttgtttttaacaacgacgactcttcactt
ggaggtaaaaaatcgactaaagctggacgaaaatacgggaatgggctcttaaagcctgtc
gtgagccatctgattgttgcggctgacttggtgtcatcactcgaagacaagtggaatgtt
caacttgttgtcaagggcagttgtacgggatcagccttggagttttgcaggtacaagcac
cctttggaaaatcgagaaggcgtgattgttataggtggagattatattacgacagattca
ggaaccggtttggtgcacacagcacccggacatggtcaagaggattttgtgactggtcaa
aagtatggtcttcctatgttgtcaccagtggatgacaacgggaactttacggacgaagca
aatgagttcgctgggatgagcgtactaagcgacggtaacgaggcagtcataaaggcactg
gatgccaactcgtctctgctgatggaagaggcttacggtaagaacaatttacaaatgttt
ccgaggattgactctcgtatagttcataagtacccgtatgactggagaacaaagaagccg
acaattttcagagctacagaacaatggtttgcttcggttgaaggcttcatgccacttgct
ctggccgcaataaaaaacgttgattggattccctcacagggagaaaataggatcacgtca
atggtaagcgggagaaaagaatggtgtatatcgagacaaagagcctggggtgtaccaata
ccagttttttatcatgtagacactggtgaaccgctcctcaacgaacagacaatctctcat
gttcaagccataattgctcaacaaggaagtgatgcatggtggtcactgaccacggaggac
ctccttccagacacttataaagcaaaagcaagcaattacaggaaagggaccgacacaatg
gatgtgtggttcgattcaggaacgtcttgggcatccgttctaggcacgaagagatggccc
gcagatgtttatctagaaggaagtgatcaacacagaggatggtttcagagctccttgctc
acgagtgttgctactaaaggagtagctccttatcgtcaagtgttgacgcatggatttgtt
ttggatgaaaaaaacgtgaaaatgagtaaatcactcggcaatgtagtggacccgcgtagc
gtgattgaagggggaaagaaccaaaaggaacaaccggcttatggagcggatgtgttgcgc
ctctgggttgctagcgtggactacacgggggacgtagcaatcgggccacagattctcaaa
cagacggcagatgtttatcgcaaactgcgaggaacactcagatatttgctctcgaacctt
catgactggaaaccagagcttgagatcgagtacgatgaccttcctggaatagataagtac
actctcttccagctcgccagcgtaatggatagcctcaaggacagcctagacaagtaccag
tttggaaaattcttccagtcggtgcaacggtatgcggtgcttgatctgtccaacttctat
ctggacatttcgaaggacagattatacgtggggggcactgatagctttacaagaagaagc
tgccaagcggttctagcttccctcttgctgtatctggcccgtggaatatcacccgttgtc
ccacacttggcagaggacgcatggcaacacctccccttctcgtacattctaccagacggc
tccaaagccgagagcgtgtttgaggcggggtggcccgaagtagacccgagatggcgaacg
atttccgatcgtgacaagaagctatggtcacttcttctagagcttcgggtggaagttaac
aaagtcttggaatcagcaaggatgggaaagctgataggagcaaacctcgacgcaaaggtt
tgccttcacttgggaggggaggacgacgcactcctccactccacactccaagccatggcc
ggctccgaggatggcaccgtcgataagctacacgttatattcttgacgtcacaggtggaa
gttgtcgattgcgaagacgcagactgtgcatacacggggagctgcaagctggagggaagc
ggcggccgtgcctggattggcgtgaagcgagccgagggacagaaatgtgagaggtgctgg
aagtactcgcccgccgtgggaagcttcacgctccactccacgctgtgcgagagatgctac
aagatccgacggggaaggggcgaagaggacgagcagcttggcgccaaagggaatgaggaa
caggggaggggagtggagagctcgatcgatgcgtgcgtgtggactttcgtgggatctcca
aatctcgagtggcattgccgccgtgttgattgcgctccacatttcactggcgatggtagc
agggcaatggggaggaggaggctgcgattcaagttcaccaatgtaatctctagagtgttc
cttctccgagcgcatcgcgtcaagcccgtggcgccatcctcagtggtagcgccggcagcg
agcaagaaatcttcttcttctttcaccagcgattccaatcgggaagaagagcccgaggag
gagaggagtctcatcgctccagctccagcggctccagctcccgcgaaggcaaagaagaag
aacaggaagccggtgtttggatacagctgctgctcgcgagaggaagccattgtccgcgag
aattgccagtacaagcgcgtcaagggattgagcaagaagcctgttggagcagcgagctct
cgagcagcgcccatggtagtcgcgtctcgccaggaggaggaaatgtgggagcgagagggc
ttgtggagcgtgattgccgcagtggacagtggcaaagtggtgaagaagaaggtggttctc
aagaagagaaagaagagccaatcctctccaaggctgctgagagctcccgcgaattcggag
atctccgcgatggaggaacaagtattgatcgtcggccaggccgcgcgggttactagcgat
ccatcttcgtcggagagggagaggaaaggatcatccacgcatacattccggctgagtacc
tcgtccggggatgccagcttgggcccggaggctctggcgtgggacaaggagcattctttg
ttcgcaagcgacgacagcagcgcgcccggctcgagcaagctcgtccaccgtgccacgact
ctggaggacgagcagcggcacgaagcgatcgaggaggtgggattaaagaatcacgcgggc
cagactcccaggcccaagaaatcttctagtagcagtagcgcaagcactagcggcagcagc
ggcggcggcacgaggggccaccaccatcgccaccacctccaccaccaccaccaccaccac
catcacaattcttcttttcatctctcgagaaatcacgctagcggcaacaagatgacggga
gcattgtcggagtttgatgagctaggcttgcttctaagttcgtcgtcaaagatgcctcct
cctcctcctcggtgcgatggcaagaggatatcatcggcaagctcgctcgaatccagcgca
aagttttgggaggatggccgtgaggtggcgagcaaagttcttccagagtttccgaggcac
aaggttggcgcggagagtgctccagctctagacgatcacgcgaggacgaagaagaagaag
aagcccaaggatctggtacgagggaaagtccgggagagcgtcccggtgatgctcgtctcc
agcaatccatacgaggatttccggcagtcaatggtccagatgatcttcgagaagcggctc
aacaaggccgcggacttggaggagctgctcgagtgctacctctacctcaatccgccgggg
tttcacgaggtgatcgtgcaagttttcacggatttgtggctccaggcgttgagcacagag
aatcagcagcagcagaatatatga
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integrated database retrieval system
