Selaginella moellendorffii: SELMODRAFT_439432
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Entry
SELMODRAFT_439432 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13141
integrator complex subunit 4
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_439432
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
SELMODRAFT_439432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
SCD
Adaptin_N
PDS5
Arm
HEAT_EZ
Cohesin_HEAT
RTP1_C1
Cnd3
CEP104-like_TOG
MMS19_N
Motif
Other DBs
NCBI-GeneID:
9652051
NCBI-ProteinID:
XP_002965675
JGI:
439432
UniProt:
D8R4E5
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MKKRRWLERDGDGDGDGATGQSSEDCMVLVADPEVRMRSIAISGMIAGARGAQLGPVREA
MQRRLWEEQEISVVQQIVTALSSIFADETTTSCLQRYYLLDGCPEPIKIRILASLVRICK
TSNEHSEVVAALQPALLQDLYGKNPVLRMWGLKFATKFFEQQRNKSWIIAALHKRFFDTH
AFVRKAALDAVISLDAVGFSFLDGLNAIALRLLEDHVSESVRLSAMELLRLWVMEVQAGE
ITASQQREINYTYLEICTMLTDPCTRVRKEACRVLGTMTSVSQKIKLHSVNKKSVLVTSG
DPLISCNINGKSPRTAIVAGAFVSAVEDEFPEVRSAAVQALSSLSLGSKEVANAGVLGLF
LDMLNDQDPAVRRASIQALYDLAGCGVFCVEDKHLRVITATLEDQNNELRHAGLKLLSSL
KLPTLVMFESAVQTLMKCLDRHPQDRKNVYEALLCLGKGHGSHVEALKSELLTQVKFVVN
GEKGLDDPSEMLSCKRITDFTKEHAPAESGDSSSTVLIMVQQAIKCALRAGSVSNDNQRE
TIRGCKKSLLVLERTSLVNLGLLYMDCLQLVAQKNSAKEPDHQKLGSVLGRMQTCFSGFS
ASGGRRLRARPALLSAGFNSRGK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggcgatggctggagcgcgatggcgatggcgatggcgatggcgccaccggg
cagtcgtctgaggattgcatggtgctggtcgcggatccagaggtgagaatgcgctccatc
gcgatctctggaatgattgccggggcgcgcggtgctcagctggggcctgtgagggaggca
atgcaacggaggctgtgggaggagcaggaaatatcggtggtccagcagattgtcaccgct
ctctcgtcgatcttcgcggatgaaacgaccacgtcgtgcttacagaggtactatctctta
gatggctgccccgagccgatcaagattcgcatcctcgcgtccctcgttcggatttgcaag
acgagcaacgagcattcggaggtggtggcggcactccagccggccttgttgcaagatctt
tacgggaagaatccggtgcttagaatgtggggcttgaagttcgcgacgaagttctttgag
cagcaacgaaacaagagctggatcatcgctgcgctgcacaagagattttttgatactcat
gctttcgtgaggaaagctgccttggatgctgtcatctccctcgacgcggtgggatttagc
ttcctcgatggtttgaatgctattgcgctccggctcttggaggatcacgtctcggagtcc
gttcgactgtccgccatggagcttctccggctatgggtgatggaagttcaagctggagaa
atcacggcatcgcaacaacgcgagataaactatacttatctagagatttgcaccatgctc
acagacccgtgcacgcgagtaaggaaagaagcttgccgtgtgcttggcactatgacatca
gtaagccagaaaattaagttgcattcggtgaacaagaagtcagtgctagtcaccagtggt
gatcctttgatctcgtgcaacattaatggtaaatcgccacggacggcaattgtggcgggt
gcttttgtttctgctgtcgaggatgagttcccagaggtgagatctgctgctgtgcaagct
ctttccagcttgagtctgggttctaaagaagtcgcaaatgccggtgtacttgggcttttc
ctggacatgttgaacgaccaagatcccgccgttcgcagggcttcgattcaagcgctatat
gaccttgctggctgtggcgttttctgcgtggaagacaaacatctgcgtgtgattactgct
acgctggaagaccaaaacaacgagctccgacatgcgggtctaaaacttttgtcttccttg
aagctcccgacgcttgtcatgttcgagtctgcagttcaaactttgatgaagtgcttagat
cgtcatccgcaggataggaagaacgtctatgaggcgctattatgcctggggaaaggacac
ggctctcatgtagaggctctaaagtctgagcttttgactcaggttaagttcgttgtgaat
ggagagaaggggttagatgatcccagtgaaatgctctcctgcaaacgaattacggatttt
acaaaagagcatgcccctgctgaatctggtgacagttccagtacggtgttgattatggtg
cagcaagctatcaaatgtgctctacgcgcagggagcgtttcaaacgacaaccaaagagaa
accatccgcggctgcaagaagtccttactagtactggagcgcacttcgctcgtcaatttg
ggactgctgtacatggactgcctccaattggtcgcacaaaaaaactcggcaaaagaacct
gaccatcagaagcttggctcggtactaggacgcatgcaaacctgtttctctggattctca
gcctcaggtggaagacgactccgagctcgtccagcgcttctctcagctggcttcaatagt
cgaggaaagtaa
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