Selaginella moellendorffii: SELMODRAFT_73877
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Entry
SELMODRAFT_73877 CDS
T01496
Symbol
SmABCI2
Name
(RefSeq) ATP-binding cassette transporter, subfamily I, member 2, SmABCI2
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_73877 (SmABCI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_73877 (SmABCI2)
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SELMODRAFT_73877 (SmABCI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
AAA_28
AAA
DUF3584
ORC-CDC6-like
AAA_25
AAA_23
AAA_22
AAA_16
Zeta_toxin
Arf
NACHT
AAA_30
AAA_24
AAA_15
AAA_14
TsaE
Motif
Other DBs
NCBI-GeneID:
9633546
NCBI-ProteinID:
XP_002960151
JGI:
73877
UniProt:
D8QPW4
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MEHEGVAPSPAPALSVRALQFSYPGQAPFVADLSLALLPGTRCLLVGANGAGKTTLLRIF
AGKHLVGGKDVVQVLGRSAFHDTALTCDGDLAYLGESWNRPIGSAGDVPLQGDFTAEHMI
FGVEGIDPDRRQRLIDLLDINLQWKMHKVSDGQRRRVQICMGLLRPYKVLLLDEITVDLD
VVGRMDLLSFFIEECTERGCTIVYATHIFDGLEAWATHLAYVVDGKLERFTMASDLLSTG
DSVKSLLNIIEPWLRDERKVRESRPKSSLPVQASPWASSRHMAYYR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgaaggagtggcgccatcgccagcgccagcattgtccgtgagggcgctgcaa
ttcagctacccaggtcaggctcccttcgtcgcggatctgtcgctggcgctgcttcctggg
acgcgatgcctgctcgtcggagcgaatggagcgggcaagacgactctgctgcggattttc
gctggtaagcacctcgtcggtgggaaagacgtcgtccaggtgctcggaagatcggcattc
catgataccgcgcttacttgcgatggagaccttgcatacctcggagagtcttggaatcgt
cctatcggctcagcgggtgatgtgccattgcaaggggattttacagcagaacacatgatc
tttggtgtcgaaggaatcgatccggatagacgacaaagattgatagatcttttggatatc
aacctgcagtggaaaatgcataaagtttccgatggtcagcgtcgccgcgtacaaatttgc
atggggcttctgcgaccttataaggttctcttgctggacgagatcactgtggatttagac
gtggttggaaggatggacttgctgagcttttttatagaggaatgcacagagagagggtgc
accattgtttatgcaacacacatttttgatggattggaggcctgggcaacacacctggcc
tatgtggttgatggaaaacttgagcggtttaccatggcttctgaccttcttagtactggc
gattccgttaagagccttctaaatattatcgagccatggctcagagacgagaggaaggtt
agagagtctcggccgaaatcctccctgccagtgcaagcctcaccttgggcttctagtcgt
catatggcttattatcgctga
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