Sphingomonas morindae: LHA26_06145
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Entry
LHA26_06145 CDS
T08557
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smor
Sphingomonas morindae
Pathway
smor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHA26_06145 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smor03400
]
LHA26_06145 (nth)
Enzymes [BR:
smor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LHA26_06145 (nth)
DNA repair and recombination proteins [BR:
smor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHA26_06145 (nth)
Prokaryotic type
LHA26_06145 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
GxGYxYP_N_2nd
Motif
Other DBs
NCBI-ProteinID:
USI74041
LinkDB
All DBs
Position
1:1253991..1254641
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AA seq
216 aa
AA seq
DB search
MTRAQIFEFYRRLAEADPAPETELAWTNPYTLLVAVALSAQATDAGVNKATRALFERVDS
PAAMLALGEEGLKAHIKTIGLFNTKAKNVIAAARILVEQHGGVVPRDRAALEALPGVGRK
TANVVLNIAFGEETIAVDTHIFRVANRTGLAPGKDVRAVEDRLVRVTPAPFRAHAHHWLI
LHGRYVCKARRPECWRCPVADLCRFKPKTPAPPAAG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcgcgcagatcttcgaattctaccgccgcctcgccgaagccgatcccgcgccc
gaaaccgagctggcctggaccaatccctatacgcttctggtggcggtggcgctgtccgcc
caggccaccgacgccggcgtcaacaaggcgacgcgcgcgctgttcgagcgcgtggacagc
cccgccgccatgctcgcgctcggcgaggaggggctgaaggcgcatatcaagaccatcggc
ctcttcaacaccaaggccaagaatgtcatcgccgccgcgcgcatcctggtggagcagcat
ggcggcgtggtgccccgcgatcgcgcggcgctggaagcgctgccgggcgtcggccgcaag
accgccaatgtcgtgctcaacatcgcctttggcgaggagacgatcgcggtggacacgcat
atcttccgcgtcgccaaccgcaccgggctggcgccgggcaaggatgtccgcgcggtggag
gacaggctggtgcgcgtgacgccggcgccgttccgggcgcatgcgcaccattggctcatc
ctgcatggccgctatgtctgcaaggcgcggcggcccgaatgctggcgctgccccgtggcc
gatctctgccgcttcaagcccaagaccccggcgccccccgccgccggctga
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