Sordaria macrospora: 10801085
Help
Entry
10801085 CDS
T01610
Symbol
SMAC4_04489
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
10801085 (SMAC4_04489)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801085 (SMAC4_04489)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
10801085 (SMAC4_04489)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA
AAA_28
AAA_22
AAA_15
AAA_23
DUF3584
PduV-EutP
AAA_14
Arf
AAA_16
RsgA_GTPase
AAA_25
ORC-CDC6-like
nSTAND3
SRP54
AAA_13
NACHT
Motif
Other DBs
NCBI-GeneID:
10801085
NCBI-ProteinID:
XP_003343830
UniProt:
F7VYS6
LinkDB
All DBs
Position
2:complement(1610136..1611032)
Genome browser
AA seq
298 aa
AA seq
DB search
MASQQPAPPTVETTHLTYTFPDRSNGVSDITLSLPPRSRTLLIGANGAGKTTLLRLLAGK
RLAPANTIKVSGVDPFKDGLEGVTYLGLEWVLNAIVRTDIGVVELLRSVGGDHYPERRDE
LVSVLDIDTNWRMHAVSDGERRRVQLAMGLIRPWTVLLLDEITVDLDVWSRAQFLGWLRR
ETETRECTVVYATHILDNLASWPTHLVHMHLGTVKGWGKAEEMLKEVDDGKNVVEGVTGN
SRLGELVLRWLRDDLKERGPRSQHMRGPEGLSYNSPGIGGYGLEAKTNKEATDGPGCN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccaacaacccgccccgcccacagtggaaaccacccacctcacctacaccttc
cccgaccgctccaacggcgtctcggacatcaccctctccctgcccccgcgctcgcgcacc
ttgttaatcggcgccaacggcgccggcaaaaccactctcctacgcctgctagcgggcaag
cgactcgcgcccgccaacaccatcaaagtctccggcgtggacccgttcaaggacggactc
gagggcgtcacctacctcggactagaatgggttctcaacgccattgtgcgcaccgacatc
ggcgtcgtcgagctcctgcggtcggtaggcggcgatcactatcccgagcgcagggacgag
ctggtgtcagtgctggacatcgacaccaactggcggatgcacgcggtctcggatggcgag
agacggcgggtgcagctggccatgggcctgatccgcccgtggacggtgctgttgctggat
gagatcacggtggacttggacgtgtggtcgcgcgcgcagtttttggggtggctgaggcgg
gagacggagacgagggagtgcacggttgtttatgccacgcatattctggataatctggcc
agctggccgacgcatctggtgcatatgcacttgggcacggtgaagggatggggcaaggcg
gaggagatgttgaaggaggtggacgatgggaagaatgtcgttgagggagtgacgggaaat
tctagactgggagagctggtgttgaggtggttgagggatgatttgaaggagagaggaccg
cgcagtcagcatatgcggggaccggagggattgagttataacagcccgggcattggaggg
tatggactggaggcgaagacgaataaggaggctacggatgggcctggttgcaactga
DBGET
integrated database retrieval system