Sordaria macrospora: 10803630
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Entry
10803630 CDS
T01610
Symbol
SMAC4_05788
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10803630 (SMAC4_05788)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10803630 (SMAC4_05788)
Spliceosome [BR:
smp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
10803630 (SMAC4_05788)
Complex C
U5 SnRNP specific factors
10803630 (SMAC4_05788)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Motif
Other DBs
NCBI-GeneID:
10803630
NCBI-ProteinID:
XP_003346251
UniProt:
F7VT88
LinkDB
All DBs
Position
1:join(2859364..2859401,2859560..2861825,2861940..2862027,2862489..2863054)
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AA seq
985 aa
AA seq
DB search
MDDDLYDEFGNFIGDAEASEEESEHGVDAGNYVYDDYPEEAPEAPAQEMMDVDDEGPSNA
VVLHEDKQYYPTAAQVYGEGVEVLVQEEDAQPLTQPIIAPVEQKKFSIEEADLPNVYFDR
TFMTDLMNFPEQIRNVAFAGHLHHGKTAFMDMLVLETHDIADRLEKRTGKKRDEQLRYTD
IHILERERGLSIKASPMSLVLQGTKGKSHLFNMIDTPGHVDFVDEVAASLRLVDGVCLVV
DVVEGVQVNTEQIIKHAVLENIPLTLIVNKMDRLILELKLPPYDAYYKLKHVIEEVNTII
ENTIPGRGEERRLSPEKGNVLFACTSMGWCFTLQSFAKMYSDSYGGVNSEEFARRLWGDI
YYNPQKRTFTRKPIEEGAKRSFVNFIMEPIYKLYSHTISESPEELKGTLKKLGIQLKPSQ
YKTDPKVLLKLVCEQFFGPSTGFVDMVCQHIPSPAEAAKQKLQQYYTGPLDSKVAESMLN
CDQNGPLVLYVSKLFSAPDAKSFYSFGRVMSGIARPGTEVRVLGEGYSIDDEEDMAMARI
SDVFIAETRYNIPTDGVPAGNWVLLGGVDNSIVKTATIVEKKFEDDEDTYIFKPLQHFTE
SVLKVAVEPINPSELPKMLDGIRKINKSYPLITTKVEESGEHIILGTGELYMDCVLHDLR
RLYADMEVRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMVAEPLEDGIAQDIESGAV
KIRDPVRKTAKFFEEKYGWDLLAARSIWAFGPDEMGPNILQDDTLPSEVDKKRLNTVKES
IRQGFSWAVREGPLCEEPIRNTKFRLIDVSLAQEAIFRGGGQIIPTSRRACYSSFLMASP
RLMEPMYSVSMTGPQDTVSTVYNILARRRGHVLSDGPIAGTPLYRVNGLLPVIDSFGFET
DLRINTPGQAMVSLVFDRWNIVPGDPLDKEIVLRPLQMANAQATARDFVLKTRRRKGLSE
DVSVAKFLEPEFYQSLIESGTLGEA
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatctgtatgacgagttcggaaactttatcggagatgctgaagcctccgag
gaagagtccgaacatggcgtcgacgctggcaactacgtttacgatgactacccagaagag
gcccccgaagctccggctcaggagatgatggatgtcgacgatgaagggccctccaacgcc
gttgttctccacgaagacaagcagtactacccgacagcggcacaagtttatggcgagggc
gtagaggttctggttcaggaggaggatgcgcaaccgttaacacaaccgattatcgcacca
gtcgagcaaaagaagttcagcatcgaagaagcagacctcccgaacgtatatttcgaccgc
acattcatgaccgatctcatgaacttccccgaacagattcgcaacgtcgcttttgctgga
catctacaccacggaaagacggccttcatggacatgttggtgttggagacgcacgacatc
gcggacagactcgagaagcggacgggaaagaagcgtgatgaacagctgcggtacacagac
atccatattctcgagcgggagcgggggctatccatcaaggcatcgcccatgagcttggtc
ctccaaggaacaaaaggaaaatcacacctcttcaacatgatcgacacgccaggtcatgta
gattttgtcgacgaagtcgcggcctccctcaggcttgtggacggtgtctgtttggtggtg
gatgtcgtggagggagtgcaggtcaacacagaacaaatcatcaagcacgccgtcttggag
aacatcccactcacgctgattgtcaacaagatggaccggttgattctcgagctcaagcta
ccaccatatgacgcctactacaaactcaagcatgtgatcgaagaagtcaacactattatc
gagaacacaattcccggccggggtgaagagcggaggttaagtccggagaagggaaatgtt
ctgtttgcctgcacgtccatgggctggtgcttcactcttcagtcattcgccaaaatgtac
tcggacagctatggtggtgtcaactcggaagagttcgcgagacgcctctggggagatatc
tactacaacccgcaaaagcgaactttcaccaggaaacccatcgaggaaggagccaagagg
tcattcgtcaacttcatcatggagccgatttacaagttgtactcgcatacgattagtgaa
agtccggaggaacttaagggcactttgaagaagttgggcatccagctcaaaccatcacag
tacaagaccgaccccaaagtcttgttgaagttggtgtgcgagcagttctttgggccatct
accgggttcgtcgacatggtctgtcagcatatcccatcaccggctgaggctgcaaagcaa
aagctccaacagtactacacaggccctctggacagcaaggttgctgagtctatgctgaac
tgcgaccagaatggcccacttgtgctgtacgtatcgaagctgttcagtgctcccgacgcc
aagagcttctactcttttggtcgtgtgatgagcggtattgcgcgccctggcacagaggta
cgcgtccttggtgagggttattccatcgacgacgaagaagatatggccatggcgaggata
tctgatgttttcattgctgagacacgatacaacatcccaaccgacggcgtgcccgctggt
aactgggtcttgttgggtggcgtggacaactcaatcgtgaagactgccactattgtggag
aaaaagttcgaggatgacgaggacacgtacatcttcaagcctcttcaacacttcacagag
tccgttcttaaggttgctgttgagcccatcaacccgtccgaactacccaagatgcttgac
ggcatcagaaaaatcaacaagagctaccccttaattaccaccaaggtggaagaatcggga
gagcatattattcttggaactggcgagctatacatggattgcgtattgcatgatctacgc
cgtctttatgccgatatggaggttagggtatcagatcctgtggtacgcttctgtgagacc
gtacaggacatgtccgcaaccaaatgctacgccatcacgccaaacaagaagaacaccatt
accatggtggcggaaccattggaggatggcatcgcgcaagacattgagtcaggggcagtc
aagattcgggatcctgtacgaaagaccgccaagttcttcgaggaaaagtatggctgggat
ctcctcgcagccaggagtatctgggctttcggtccagacgagatggggcccaatatcttg
caggacgacacattaccctcagaggttgacaagaagcgactcaacacagtcaaggagtcc
attcgccaaggtttcagttgggcagtccgtgaaggcccgctttgcgaagagccaatacgc
aataccaagttccgtctcatcgacgtatcgcttgcccaggaggccatcttccgtggcggt
ggtcagatcatccccacgtcccgccgcgcctgctacagctcgttcctgatggcctcgcct
cgcttgatggagcccatgtactcggtttccatgaccggccctcaggacaccgtcagcacc
gtttacaacatcctggctcgccgtcgcggccacgtcctctccgacggtcccattgccggc
accccactttaccgtgtcaacggcctgctacctgtcatcgacagtttcggcttcgaaacc
gacctgaggatcaatacgcccggccaggccatggtcagtctagtatttgacaggtggaac
attgtgccaggtgatccgctcgacaaggagattgtcctgcgtcctctgcagatggctaac
gcgcaggcgacggcgagagactttgtgctgaagacgagaaggcgcaagggcttgagcgag
gatgtcagtgtggccaagttcttggagcccgagttttaccagagcttgatagagagcggt
actcttggcgaggcttga
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