Skermanella mucosa: JL100_005115
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Entry
JL100_005115 CDS
T07652
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_005115
01503 Cationic antimicrobial peptide (CAMP) resistance
JL100_005115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smuc03036
]
JL100_005115
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_005115
01504 Antimicrobial resistance genes [BR:
smuc01504
]
JL100_005115
Chromosome and associated proteins [BR:
smuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL100_005115
Transporters [BR:
smuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL100_005115
Antimicrobial resistance genes [BR:
smuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL100_005115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
FYTT
Motif
Other DBs
NCBI-ProteinID:
UEM22134
LinkDB
All DBs
Position
SKMUc:complement(1105864..1107081)
Genome browser
AA seq
405 aa
AA seq
DB search
MISLPPPPPDARAQRDGPRRRGAVRDVLVPFLAGAGLLFLAACDQGGDQAQGNAQQQPQQ
PVPVGVVEVRLEAVTLGETFVGRIEAIQRVELRARVTGFLEERLFREGETVEQGTPLFRI
EPEIYEAVVEQRRADLARAEAEQENAIVQLRRAQELVQRNNIPEATVDERQAAARTAEAG
VLQARAALRQAEIDLGYTEIRSPIAGRIGQALFDVGDLVNPESGALAELVTQDPVYVLFQ
VSQRTLLDAQQAAGAQGLNPDSFVVRVLLPDGSEYRYQGKVNFVGITVSQQTDTVPVRAE
LPNPEGLLRDGQFVRVLIQPAEPEQAITIPQAAIQADQQGNFVLGVDGENKVRIQRVETG
ETLDQGRVVVRSGLQQGDRVIIQGIQQVRPGAPVDPSPIDPDEGA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatctccttgccgcccccgccgcccgatgcgcgcgcccaacgtgacggaccgcgccgc
cggggcgccgtccgggacgtcctcgtccccttcctggccggcgccggcctgctgttcctt
gccgcgtgcgaccagggcggcgaccaggcacaggggaatgcccagcaacagccgcagcag
cctgttccggtcggcgtcgtcgaggtcaggctcgaggccgtgaccttgggcgagaccttc
gtgggccggatcgaggcgatccagcgcgtggagttgagggcgcgggtcaccggcttcctg
gaggagcggctgttccgggagggcgagaccgtcgaacagggaacgccgctgttccggatc
gagccggaaatctacgaggcggtggtcgagcagcgccgcgccgacctggcccgcgccgag
gccgagcaggagaacgcgatcgtccagctccgccgcgcccaggaactggtccagcgcaac
aacatccccgaagccacggtggacgagcggcaggccgccgcccgcaccgccgaggccggc
gtgctccaggcgagggcggcgctgcgccaggcggaaatcgatctcggctataccgagatc
cggtcgccgatcgccggacggatcggacaggccctgttcgacgtcggcgacctggtcaac
ccggagtccggggccttggccgagctggtgacccaggatcccgtctacgtcctgttccag
gtcagccagcgcaccctgctcgacgcccagcaggcggcgggagcccaggggctgaacccc
gacagtttcgtcgtccgggtgctgcttcccgacggcagcgaataccgataccagggcaag
gtgaatttcgtcggcatcacggtcagccagcagaccgacacggtgccggtccgcgccgag
ttgcctaaccccgagggcctgctgcgcgacggccagttcgtccgcgtcctgatccagccg
gccgagcccgagcaggccatcacgataccccaggcggcgatccaggccgaccagcagggc
aatttcgtgctgggcgtggacggagagaacaaggtgcggatccagcgggtcgaaaccggc
gagaccctggaccagggccgcgtcgtcgtgcgttccggcctgcagcagggcgaccgggta
atcatccagggcatccagcaggtccgccccggcgcacccgtggatcccagcccgatcgat
cccgacgaaggagcgtga
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