Skermanella mucosa: JL100_006540
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Entry
JL100_006540 CDS
T07652
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_006540
01503 Cationic antimicrobial peptide (CAMP) resistance
JL100_006540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smuc03036
]
JL100_006540
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_006540
01504 Antimicrobial resistance genes [BR:
smuc01504
]
JL100_006540
Chromosome and associated proteins [BR:
smuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL100_006540
Transporters [BR:
smuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL100_006540
Antimicrobial resistance genes [BR:
smuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL100_006540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UEM22399
LinkDB
All DBs
Position
SKMUc:complement(1406660..1407781)
Genome browser
AA seq
373 aa
AA seq
DB search
MTMVRQIVIVLVLIALSAGAWWYLETPGSDAAQQAGEGPPAVPVEVAEARRGEVSEVIEA
VGTTRPRQSIEVIADDSGRVDEILFETGQRVEQGQPLVRLDRGIQEANLAEAEAVLVDAR
AQLERARRLVSNSAVSEARVDELRAAFLTAEARVAAERQRLRDRTVNAPFAGIVGLREVD
VGARVTDSTVLTRLDDLSVIELEFAVPERFFGAIRQGQPVSATSTAFPDTDFTGAVAAID
TRIDAVSRSFRVRAEFPNPEGRLPGGLFMLARVTLSTRPDAILVPEEAVLAEGRSNFVYR
IVGTPAEPRAERVEIRLGQRRVGEVEVVEGIGIGDRVVTAGLQRLRPGSAVRLPTVPAPT
SEDRADKVAERRG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtccgccagatcgtcatcgtcctggtcctgatcgccctttccgcaggtgcc
tggtggtacctggagacgccgggaagcgacgccgcccagcaagccggggaaggccctccc
gccgttcccgtcgaagtcgccgaagcccgccggggcgaggtttccgaggtgatcgaggcg
gtgggcaccacccggccgcgccagtcgatcgaagtgatcgccgacgacagcggccgggtg
gacgagatcctgttcgagaccgggcagcgcgtcgaacagggccagcccctggtccggctg
gaccgcggcatccaggaagcgaacctcgccgaggccgaagccgtcctggtcgatgcccgg
gcgcagctggagcgcgcccgacggctcgtctccaacagcgccgtctccgaagcgcgggtg
gacgagcttcgcgcggccttcctcacggccgaggcgcgcgtcgcggcggagcgtcagcgg
ctgcgcgaccggacggtcaacgcccccttcgccggcatcgtcggattgcgggaggtcgac
gtgggcgcccgcgtcaccgacagcaccgtgctgacccggctggacgacctgtccgtcatc
gagctcgaattcgcggtgccggagcgcttcttcggcgcgatccgccagggccagcccgtg
agcgccaccagcacggccttcccggacaccgacttcaccggcgcggtcgccgccatcgat
acccggatcgacgcggtatcgcgttcattccgggtccgtgccgaatttcccaaccccgag
ggacgcctgcccggcggcctgttcatgctggcccgggtcaccctgtccacccgccccgac
gccatcctggtcccggaggaggccgtgctggccgaaggacgctccaacttcgtctaccgc
atcgtcggaacgccggccgagccccgggcggagcgggtcgagatccgcctgggccagcgc
cgggtcggcgaggtcgaggtggtcgagggcatcgggatcggtgaccgcgtcgtgaccgcg
ggcctccagcggctgcgccccggctcggccgtccggctgcccaccgtaccggcccccact
tccgaggaccgcgccgacaaggtggcggagcgcaggggatga
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integrated database retrieval system
