Skermanella mucosa: JL100_007850
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Entry
JL100_007850 CDS
T07652
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_007850
01503 Cationic antimicrobial peptide (CAMP) resistance
JL100_007850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smuc03036
]
JL100_007850
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_007850
01504 Antimicrobial resistance genes [BR:
smuc01504
]
JL100_007850
Chromosome and associated proteins [BR:
smuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL100_007850
Transporters [BR:
smuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL100_007850
Antimicrobial resistance genes [BR:
smuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL100_007850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
CzcB_C
RND-MFP_C
BSH_CzcB
Beta-barrel_RND
HH_MFP_RND
Biotin_lipoyl
BSH_YknX
BSH_Fcp1
MlaD
BSH_CusB
Motif
Other DBs
NCBI-ProteinID:
UEM22652
LinkDB
All DBs
Position
SKMUc:complement(1717430..1718527)
Genome browser
AA seq
365 aa
AA seq
DB search
MRLIWQILLIAGLGTGAAGAWYGIPALHGNGPQAAAPDRAARPVNVVAEPARIGEIATVA
EAVGTLRANEAVTVNSKQTGIIRAIRFDEGQWVERGSVLIELDDAEARAQLAVAEADRRN
ARQLLERSRTLLTRQAVAEARVDELTAALDRADAAARAARARLQELVVTAPFAGQTGLRR
VSPGALVTSGTAITTLDDIRTVKLDFRVPEAALGGLRPGLAVSARSPAFPGETFTGVVSV
IDTRVDPVTRAVEVVAALPNDQLRLRPGMFMNVGLTLSSRADAVLIAEEALVPLGERQFV
FVVTDGHARRRAVTIGQRHDGMVEVVEGVEPGELVVVRGTQRVRDGAPVKAEREPPSAAR
PAAGS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgatctggcagattctcctgatcgcggggctgggcaccggcgccgcgggtgcc
tggtacggcatccccgcgctgcacgggaacggaccgcaggcggcggcgcccgaccgcgcc
gcgcgaccggtcaatgtcgtggcggagcccgcccgcatcggggagatcgcgaccgtggcc
gaggcggtcggcaccctgcgcgccaacgaggcggtgacggtgaattccaagcagaccggc
atcatccgcgcgatccggttcgacgagggccagtgggtcgagcggggctcggtcctgatc
gaactggacgacgccgaggcccgcgcccagctcgccgtcgccgaggccgaccggcgcaac
gcccggcagcttctggagcgctcgcgcaccctgctgacccggcaggccgtcgcggaggcc
agggtggatgagctgaccgcggcgctggacagggccgacgccgcggctcgggccgcccgc
gcccggctgcaggagcttgtcgtgacggcgcccttcgccgggcagaccggcctgcgccgg
gtcagtcccggcgcgctggtgaccagcgggacggcgatcacgacgctggacgacatccgc
acggtgaagctggatttccgcgtgccggaggcggcgctgggcgggctccggccggggctc
gccgtgtccgccaggagcccagccttccccggcgagaccttcaccggcgtggtctccgtc
atcgacacgcgggtcgatccggtgacccgggcggtcgaggtggtggccgccctgcccaac
gaccagctgcgcctgcggcccggcatgttcatgaatgtcggcctgaccctgtcgtcgcgc
gccgacgccgtgctgatcgcggaggaggcgctggtcccgctgggcgagcgccagttcgtc
ttcgtcgtgaccgacggccacgcccggcgccgcgccgtcacgatcgggcagcgtcacgac
ggcatggtcgaggtggtcgagggcgtggagcccggcgagctggtcgtcgtccgaggcacc
cagcgggtgcgcgacggcgccccggtcaaggccgagcgggaaccgccctccgccgcgcgc
ccggctgccgggagctga
DBGET
integrated database retrieval system
