Skermanella mucosa: JL100_020785
Help
Entry
JL100_020785 CDS
T07652
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00540
Lipopolysaccharide biosynthesis
smuc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JL100_020785 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
smuc01005
]
JL100_020785 (lpxC)
Enzymes [BR:
smuc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
JL100_020785 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
smuc01005
]
Lipid A
JL100_020785 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
SH3_4
Motif
Other DBs
NCBI-ProteinID:
UEM19509
LinkDB
All DBs
Position
SKMUc:4460079..4461023
Genome browser
AA seq
314 aa
AA seq
DB search
MSEQSQSNETKFQQTLKSPINCTGIGLHSGSKVSMRLMPSDANTGIVFVRTDQPADRATV
RADWDRVTDTKLCTVISNDAGVSIGTIEHLMAALRGCGIDNAVIELNGPEVPIMDGSSAP
FVFLIECAGIRQQDKPRRLIKILKQVTVGDQTRFASLTPSPVTGFSFEIDFASAAVARQE
TYVKLGSGTFKGELARARTFGFLHEVDQMRKLGLARGGSLDNAIVINGDKVLNEGGLRYS
DEFVRHKILDSIGDLYLAGAPIVGHFHGCRSGHALNNQLLRALFADQSAWCYVDADEAGA
TPAEWAREKIAAVA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagcaaagccagagtaacgagacgaaatttcagcagacgctgaagagcccgatc
aattgcaccggcatcggtctgcattccgggtccaaggtctccatgcgcctgatgccgtcg
gatgcgaataccggcatcgtgttcgtccggaccgaccagccggccgaccgcgcgaccgtt
cgggcagactgggaccgggtgaccgacaccaagctctgcaccgtgatctccaacgacgcc
ggggtgtcgatcggcacgatcgagcacctgatggcggcgctgcgcggctgcggcatcgac
aacgcggtgatagagctgaacggcccggaagtgccgatcatggacggcagttccgctccc
ttcgtgttcctgatcgagtgcgccggcatccggcagcaggacaagccgcgccgcctgatc
aagatcctcaagcaggtcaccgtcggcgaccagacccgcttcgccagcctgacgccctcg
ccggtgaccggtttcagcttcgagatcgacttcgccagcgccgcggtggcccgccaggag
acctacgtcaagctcggcagcggcaccttcaagggtgaactcgctcgcgcccgcaccttc
ggcttcctgcacgaggtcgaccagatgcgcaagctgggactggcccgcggcggctcgctg
gacaacgccatcgtcatcaacggcgacaaggtgctgaacgagggtggcctgcgctactcg
gacgagttcgtgcgccacaagatcctggacagcatcggcgacctgtacttggccggcgcg
ccgatcgtcggccatttccacggctgccgctcgggccatgctctgaacaaccagctgttg
cgcgccctgttcgccgaccagagcgcctggtgctacgtcgatgccgacgaggcaggcgcg
acgccggccgaatgggcccgggagaagatcgcggccgtcgcgtga
DBGET
integrated database retrieval system
