Skermanella mucosa: JL100_029530
Help
Entry
JL100_029530 CDS
T07652
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smuc
Skermanella mucosa
Pathway
smuc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL100_029530 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smuc03400
]
JL100_029530 (nth)
Enzymes [BR:
smuc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JL100_029530 (nth)
DNA repair and recombination proteins [BR:
smuc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JL100_029530 (nth)
Prokaryotic type
JL100_029530 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UEM21155
LinkDB
All DBs
Position
SKMUc:6336290..6336967
Genome browser
AA seq
225 aa
AA seq
DB search
MKPADIEEFFRRLAADNPAPKTELEFTNPYTLLVAVVLSAQATDVGVNRATGPLFQVVQT
PQQMLDLGEEKLRHYIRTIGLFNTKARNVMKLSEILVAEHGGEVPRKRKELEALPGVGRK
TANVVLNVAFGQTTIAVDTHIFRVSNRTGLARGKTPEEVERKLVRYVPARWKPHAHHWLI
LHGRYICKARKPDCPACVVRDLCAYPDKTTERDMLEDPPVPVSAG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagccgacatcgaagaattcttccgccgccttgccgccgacaacccggcgccc
aagaccgaattggagttcaccaacccctacaccctgctggtcgccgtggtgctgtccgcc
caggcgaccgacgtgggtgtcaacagggcgacgggcccgctgttccaggtggtgcagacg
ccgcagcagatgctcgacctgggggaggaaaagcttcgccactacatcaggacgatcggc
ctgttcaacaccaaggccaggaacgtcatgaagctgtcggagatcctggtcgccgagcac
ggcggcgaggtgccgcgcaagcggaaggagctggaagccttgcccggcgtcggccgcaag
accgccaacgtcgtgctgaacgtggcgttcggccagaccaccatcgcggtggatacccac
atcttccgggtctccaaccgcaccgggctggcgcgcggcaagacgccggaggaggtcgag
cgcaagctggtgcgctacgtgccggcccgctggaagccccacgcgcaccattggctgatc
ctgcacggccgctacatctgcaaggcccgcaagccggactgcccggcctgcgtcgtgcgc
gacctctgcgcctatcccgacaagaccaccgagcgcgacatgctggaagacccgcccgtg
ccggtcagcgccggctga
DBGET
integrated database retrieval system
