Sphingobacterium multivorum: I6J00_19775
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Entry
I6J00_19775 CDS
T07579
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smui
Sphingobacterium multivorum
Pathway
smui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J00_19775 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smui03400
]
I6J00_19775 (nth)
Enzymes [BR:
smui01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I6J00_19775 (nth)
DNA repair and recombination proteins [BR:
smui03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J00_19775 (nth)
Prokaryotic type
I6J00_19775 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
HHH_8
DUF2400
HHH_2
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
QQT47735
LinkDB
All DBs
Position
complement(4507750..4508427)
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AA seq
225 aa
AA seq
DB search
MLKQERYKAFVDYFSKNSPDAQTELNYSNPFELLVAVILSAQCTDKRINQVTPKLFARYP
DAHSLAASSVDEVFSYIRSVSYPNNKAKHLVGMAQLLIEKFDNIVPEKIEDLVKLPGVGR
KTANVISSVVYHNPAMAVDTHVYRVANRLGLTYRATTPLAVEKQLVKNLPKDTIAIAHHW
LILHGRYICLARKPLCEKCPITYMCKYFEKNHHIKSVSAIPETKN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaagaacgatacaaggctttcgtagattatttctccaaaaatagtcctgac
gcacagacagaactcaactatagtaatccctttgaattactggttgccgttattttatct
gcacagtgtacagataaaaggatcaaccaagtcacgcccaagttgtttgcacgctaccca
gatgcacacagcttggcagcttccagcgtagacgaggtgtttagctatatacgatctgta
agctatccgaataacaaggccaaacaccttgtggggatggctcagctactgattgaaaag
ttcgacaatattgtacccgaaaaaattgaggatcttgtgaaacttccaggtgtaggtcga
aaaacagctaatgtcatttcctctgttgtttatcataatcccgctatggccgtagatacc
catgtttatcgtgttgcaaaccgtcttgggctaacttatcgtgcaacaacaccattagct
gtggaaaaacaattggtaaaaaatctacctaaagacacgattgccattgcccatcattgg
cttatcttacacgggcgttatatatgcctggcccgaaaaccactgtgtgagaaatgccct
atcacttatatgtgcaaatactttgaaaaaaatcaccatataaaaagtgtctcagctata
ccagagacaaaaaactaa
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