Sulfurospirillum multivorans: SMUL_1953
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Entry
SMUL_1953 CDS
T03049
Symbol
ligA1
Name
(GenBank) DNA ligase [NAD(+)]
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
smul
Sulfurospirillum multivorans
Pathway
smul03030
DNA replication
smul03410
Base excision repair
smul03420
Nucleotide excision repair
smul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMUL_1953 (ligA1)
03410 Base excision repair
SMUL_1953 (ligA1)
03420 Nucleotide excision repair
SMUL_1953 (ligA1)
03430 Mismatch repair
SMUL_1953 (ligA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smul03032
]
SMUL_1953 (ligA1)
03400 DNA repair and recombination proteins [BR:
smul03400
]
SMUL_1953 (ligA1)
Enzymes [BR:
smul01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SMUL_1953 (ligA1)
DNA replication proteins [BR:
smul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SMUL_1953 (ligA1)
DNA repair and recombination proteins [BR:
smul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SMUL_1953 (ligA1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMUL_1953 (ligA1)
MMR (mismatch excision repair)
DNA ligase
SMUL_1953 (ligA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SMUL_1953 (ligA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
Nlig-Ia
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
AHJ13208
UniProt:
A0AA86DYF5
LinkDB
All DBs
Position
complement(1859320..1861266)
Genome browser
AA seq
648 aa
AA seq
DB search
MNHEEYLAKIERANAWAKAYYVDDAPLASDEEYDTLYHEILNYENENPLFADEHSPTKRV
GGMVLEGFNKAEHKARMWSMEDVFNEADLDAWIERVKKVKENFTFYCEPKFDGASLNLIY
ENGMLKQAITRGDGSIGEDVTENVKTIGSIPLRINYQEPIEIRGEVVIKKADFERLNTDR
LSAGEALFANPRNAAAGSLRQLDTSITAKRKLMFYPWGIGINSLTQSFLSQKMSFVYSLG
FLQPPRIVVTQSVDDVHTLYAELIAKRDEIEMMMDGMVVKVDDVSLQEELGYTVKYPKWM
VAFKFPAIEKVTRLKDITLQVGRTGVVTPVAEVEAVNIEGVIVERATLHNFDEIERKDIR
IGDSVIIIRSGDVIPKIIKVLTERRDGSEKVVERPLNCPVCGSELLDDGALIKCQNLSCD
ARVVGAIIHFASKKALNIDGLGDKIVEQLYAQKLVLHVKDLYTLNSEQLLALEGFKAKKA
DNLLAAIEQSKGVSLEKFINALGIEHIGEVAAKKIARAFGLEWLEANYEQIIALEGFGEE
MAKSLVEFIHVNKAETYELMAVLQPIASKLEITESVFTGKTVVLTGSMSQPRDEIKVMLE
KLGAKVSGSVSKKTDFVIYGEEAGSKLAKALELGVKTLSESELNGMIK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaagagtatttagccaaaatcgagcgtgccaacgcgtgggcaaaagcctat
tacgtcgatgatgcgccgcttgcgagtgatgaagagtacgacacactttaccatgaaatt
ttaaactacgagaatgaaaatccactctttgccgatgagcacagtcccacaaaacgtgtg
ggtggcatggtgctagagggctttaataaagcagaacacaaagcgcgcatgtggagcatg
gaagatgtgtttaatgaagcggatcttgatgcatggatcgaacgtgttaagaaagtcaaa
gagaattttactttttactgcgaaccaaaatttgatggtgcgagtctgaacctcatttat
gaaaatggtatgttaaagcaggcgattacaagaggtgatggaagcattggcgaagatgta
actgaaaatgttaagaccatcggctctattcctttacgcatcaactatcaagaacccatt
gaaattcgtggcgaagtggtcatcaaaaaagcagactttgaaagactcaacactgatcgt
ttaagcgcaggtgaggcgttgtttgcaaatccacgcaatgctgcagcaggaagcctcagg
cagctcgatacgagcattacggcaaagcgtaaactgatgttttacccatggggcattggg
attaatagcttaacacagagttttttgagtcaaaaaatgagctttgtctacagccttggt
tttttacaaccacctcgtatcgtcgtaacgcaaagcgtggatgatgtgcataccctctac
gcagaactcattgctaagcgtgatgagatcgagatgatgatggatggtatggttgttaag
gtcgacgatgtgagcttgcaagaagagcttggttataccgtcaaataccccaaatggatg
gtcgcgtttaaatttcctgcgattgagaaagtaacacgacttaaagatattacgctgcaa
gtgggcagaacaggcgtggtaacacctgtggcggaagtggaagcagtcaatatcgaaggc
gtcatcgtagagcgagcaacactgcacaattttgatgagatcgagcgtaaagacatacgc
atcggcgatagcgtcattatcattcgcagtggtgatgtgattcctaaaattattaaggtt
ttaacggagcgacgtgatggaagtgaaaaagtcgttgagcgaccgctcaattgccctgtg
tgtggcagtgagcttttggacgatggcgcactgattaaatgtcaaaatctctcctgcgat
gcgcgggtcgtgggggcgattattcactttgcgtctaaaaaagcgctcaatattgacggg
cttggcgataaaatcgttgagcaactttacgcgcaaaaactcgttttacatgtaaaagat
ctctataccttgaatagtgagcaactcctcgcattggagggctttaaagcgaaaaaagca
gacaaccttttagcggcaattgagcagagcaaaggggtgagtttagagaagttcatcaac
gcgcttggtattgaacatatcggtgaagtggcggctaaaaagatcgcgcgtgcgtttggg
ttggagtggttggaagcaaattacgagcagatcatcgcccttgaaggctttggcgaagag
atggcgaagagtttagttgagtttatccatgtcaacaaagccgaaacgtatgagctgatg
gcagtgcttcagcctatcgcttcaaaactagagataaccgagtctgtttttacgggcaaa
acggtggtgcttacaggctcaatgagccaaccacgcgatgagataaaagtgatgttagag
aaattgggtgcaaaagtgagtggaagtgtctctaaaaagaccgattttgtcatttatggc
gaagaagcaggcagtaagttagctaaagccttagaactgggtgtcaagacactgagtgaa
agtgaattaaacgggatgataaaatga
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