KEGG   Sulfurospirillum multivorans: SMUL_1953
Entry
SMUL_1953         CDS       T03049                                 
Symbol
ligA1
Name
(GenBank) DNA ligase [NAD(+)]
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
smul  Sulfurospirillum multivorans
Pathway
smul03030  DNA replication
smul03410  Base excision repair
smul03420  Nucleotide excision repair
smul03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SMUL_1953 (ligA1)
   03410 Base excision repair
    SMUL_1953 (ligA1)
   03420 Nucleotide excision repair
    SMUL_1953 (ligA1)
   03430 Mismatch repair
    SMUL_1953 (ligA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smul03032]
    SMUL_1953 (ligA1)
   03400 DNA repair and recombination proteins [BR:smul03400]
    SMUL_1953 (ligA1)
Enzymes [BR:smul01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SMUL_1953 (ligA1)
DNA replication proteins [BR:smul03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SMUL_1953 (ligA1)
DNA repair and recombination proteins [BR:smul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SMUL_1953 (ligA1)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SMUL_1953 (ligA1)
   MMR (mismatch excision repair)
    DNA ligase
     SMUL_1953 (ligA1)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SMUL_1953 (ligA1)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 HHH_5 PTCB-BRCT DNA_ligase_ZBD BRCT_2 Nlig-Ia Glyco_trans_1_4
Other DBs
NCBI-ProteinID: AHJ13208
UniProt: A0AA86DYF5
LinkDB
Position
complement(1859320..1861266)
AA seq 648 aa
MNHEEYLAKIERANAWAKAYYVDDAPLASDEEYDTLYHEILNYENENPLFADEHSPTKRV
GGMVLEGFNKAEHKARMWSMEDVFNEADLDAWIERVKKVKENFTFYCEPKFDGASLNLIY
ENGMLKQAITRGDGSIGEDVTENVKTIGSIPLRINYQEPIEIRGEVVIKKADFERLNTDR
LSAGEALFANPRNAAAGSLRQLDTSITAKRKLMFYPWGIGINSLTQSFLSQKMSFVYSLG
FLQPPRIVVTQSVDDVHTLYAELIAKRDEIEMMMDGMVVKVDDVSLQEELGYTVKYPKWM
VAFKFPAIEKVTRLKDITLQVGRTGVVTPVAEVEAVNIEGVIVERATLHNFDEIERKDIR
IGDSVIIIRSGDVIPKIIKVLTERRDGSEKVVERPLNCPVCGSELLDDGALIKCQNLSCD
ARVVGAIIHFASKKALNIDGLGDKIVEQLYAQKLVLHVKDLYTLNSEQLLALEGFKAKKA
DNLLAAIEQSKGVSLEKFINALGIEHIGEVAAKKIARAFGLEWLEANYEQIIALEGFGEE
MAKSLVEFIHVNKAETYELMAVLQPIASKLEITESVFTGKTVVLTGSMSQPRDEIKVMLE
KLGAKVSGSVSKKTDFVIYGEEAGSKLAKALELGVKTLSESELNGMIK
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgaatcacgaagagtatttagccaaaatcgagcgtgccaacgcgtgggcaaaagcctat
tacgtcgatgatgcgccgcttgcgagtgatgaagagtacgacacactttaccatgaaatt
ttaaactacgagaatgaaaatccactctttgccgatgagcacagtcccacaaaacgtgtg
ggtggcatggtgctagagggctttaataaagcagaacacaaagcgcgcatgtggagcatg
gaagatgtgtttaatgaagcggatcttgatgcatggatcgaacgtgttaagaaagtcaaa
gagaattttactttttactgcgaaccaaaatttgatggtgcgagtctgaacctcatttat
gaaaatggtatgttaaagcaggcgattacaagaggtgatggaagcattggcgaagatgta
actgaaaatgttaagaccatcggctctattcctttacgcatcaactatcaagaacccatt
gaaattcgtggcgaagtggtcatcaaaaaagcagactttgaaagactcaacactgatcgt
ttaagcgcaggtgaggcgttgtttgcaaatccacgcaatgctgcagcaggaagcctcagg
cagctcgatacgagcattacggcaaagcgtaaactgatgttttacccatggggcattggg
attaatagcttaacacagagttttttgagtcaaaaaatgagctttgtctacagccttggt
tttttacaaccacctcgtatcgtcgtaacgcaaagcgtggatgatgtgcataccctctac
gcagaactcattgctaagcgtgatgagatcgagatgatgatggatggtatggttgttaag
gtcgacgatgtgagcttgcaagaagagcttggttataccgtcaaataccccaaatggatg
gtcgcgtttaaatttcctgcgattgagaaagtaacacgacttaaagatattacgctgcaa
gtgggcagaacaggcgtggtaacacctgtggcggaagtggaagcagtcaatatcgaaggc
gtcatcgtagagcgagcaacactgcacaattttgatgagatcgagcgtaaagacatacgc
atcggcgatagcgtcattatcattcgcagtggtgatgtgattcctaaaattattaaggtt
ttaacggagcgacgtgatggaagtgaaaaagtcgttgagcgaccgctcaattgccctgtg
tgtggcagtgagcttttggacgatggcgcactgattaaatgtcaaaatctctcctgcgat
gcgcgggtcgtgggggcgattattcactttgcgtctaaaaaagcgctcaatattgacggg
cttggcgataaaatcgttgagcaactttacgcgcaaaaactcgttttacatgtaaaagat
ctctataccttgaatagtgagcaactcctcgcattggagggctttaaagcgaaaaaagca
gacaaccttttagcggcaattgagcagagcaaaggggtgagtttagagaagttcatcaac
gcgcttggtattgaacatatcggtgaagtggcggctaaaaagatcgcgcgtgcgtttggg
ttggagtggttggaagcaaattacgagcagatcatcgcccttgaaggctttggcgaagag
atggcgaagagtttagttgagtttatccatgtcaacaaagccgaaacgtatgagctgatg
gcagtgcttcagcctatcgcttcaaaactagagataaccgagtctgtttttacgggcaaa
acggtggtgcttacaggctcaatgagccaaccacgcgatgagataaaagtgatgttagag
aaattgggtgcaaaagtgagtggaagtgtctctaaaaagaccgattttgtcatttatggc
gaagaagcaggcagtaagttagctaaagccttagaactgggtgtcaagacactgagtgaa
agtgaattaaacgggatgataaaatga

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