Simonsiella muelleri: BWP33_04040
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Entry
BWP33_04040 CDS
T05344
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
smur
Simonsiella muelleri
Pathway
smur03030
DNA replication
smur03410
Base excision repair
smur03420
Nucleotide excision repair
smur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWP33_04040
03410 Base excision repair
BWP33_04040
03420 Nucleotide excision repair
BWP33_04040
03430 Mismatch repair
BWP33_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smur03032
]
BWP33_04040
03400 DNA repair and recombination proteins [BR:
smur03400
]
BWP33_04040
Enzymes [BR:
smur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BWP33_04040
DNA replication proteins [BR:
smur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BWP33_04040
DNA repair and recombination proteins [BR:
smur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BWP33_04040
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWP33_04040
MMR (mismatch excision repair)
DNA ligase
BWP33_04040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BWP33_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
BRCT_2
DUF4796_N
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AUX61064
UniProt:
V9HJW0
LinkDB
All DBs
Position
complement(815756..818152)
Genome browser
AA seq
798 aa
AA seq
DB search
MSQNNQIQQQIKILTEKLNRYAHEYYTLDAPSVPDSEYDRLYRELEALEMAYPTFRLPES
PTQRVGGAILREFASVRHKIPMLSLNNAFSPLDDNGKFIHTETLAFDERVRKDLELSKVE
YTIEPKFDGLAISLLYQDGIFIQAATRGDGITGEDVTENIKTVRNIPLKLQGQYIPDLIE
VRGEVLMLKKDFEQLNQRQIAQNQKTFANPRNAAAGSLRQLNSRIAAERKLHFFGYGIAQ
FSGIQPENAPKTHAEELLWLQDLGFSLPTGNWHICANIAEVLQQYENLNAKRSTLPYEID
GMVIKVNSLAEQEKLGFVSRAPRWAIAHKFPAEEAMTQVETIDVQVGRTGAITPVARLKP
VSVGGVIVINATLHNQDEVSRKDIRIGDTVVVRRAGDVIPEVVRVVLEHRPMKIVEIQSN
NIQDDLFPTTKTQSVPEFPPFRLPENCPVCGSAIEREAGEAIARCTGGMICKAQRSQGLI
HFASRKAMDIVGLGDKQIEALVTQDILHSFADIYQLDIEKLQQIKDSKSSATKWAENILI
GIENSRKPLLSRFLYSLGIRHVGESTAKQLANAFGDLATVRHAPEPVLACLPDIGSVVAH
SIAHYFRQPEQQKLLDDLLRFVEPQHTVLTINICDFAKPARWLSRLPSYKLSEKRAQELW
DLAGNSVDGLLTDRVLPREWQDWRKIAENAALLREIDESLTKFDSKQNEAYYLPLGTGSL
KSEITGKTFVLTGTLPTLKREDAAAMIEAAGGKVSGSVSKKTDFVVAGEAAGSKLEKALS
LGITVLNEDEFLAMFQAD
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaataaccaaatccaacaacaaatcaaaatattaaccgaaaaactcaaccgc
tacgcccatgagtactacacactagatgcacccagcgtacccgacagcgaatacgaccgc
ctatatcgcgaattggaagccctagaaatggcgtatcccactttcaggctgcctgaaagc
ccaactcaacgcgtgggcggtgcaattttgcgcgaatttgccagtgtgcgccataaaatc
ccaatgctatcgctaaataatgccttttcaccgttagatgataacggtaaatttattcac
actgaaaccttggcatttgacgagcgcgtacgcaaagatttggagctaagcaaagtagaa
tatacaattgagccaaaatttgacggtttggcaattagtttattgtatcaagacggtatt
tttattcaggccgccacgcgtggcgatggcataacgggcgaagatgttaccgaaaacatc
aaaaccgtgcgcaatatcccattgaaattacaaggtcaatatattcctgatttaattgaa
gtacgcggcgaagtattgatgctaaaaaaagattttgaacaactcaatcaacgccaaatt
gcacaaaatcaaaaaaccttcgccaatccgcgtaacgcagcagcaggcagcctacgccaa
ctcaactcgcgcattgctgctgaacgtaaattgcattttttcggctacggcatcgcgcaa
ttcagtggtatacagcctgaaaatgcacccaaaacccatgcggaagaattattgtggttg
caagatttggggtttagcttaccaactggaaattggcatatttgcgcaaatatcgccgaa
gttttacaacaatatgaaaatttaaatgccaaacgttcaactttaccctatgaaattgat
ggcatggttatcaaagtaaattcattggcagaacaagaaaaattaggctttgtttcgcgt
gcgccacgttgggcaatcgcgcataaatttcccgccgaagaagccatgacacaggtagaa
accattgatgtacaagtcgggcgaacaggagccattacacctgtggcgcggctgaaaccc
gtatcagtgggtggcgtcatcgttatcaacgcaactttgcataatcaagacgaagtgtcg
cgcaaagatatacgcataggagacacggtcgtggtgcgccgcgcaggcgatgtgattccc
gaagtggtgcgcgtggtattggaacatcgcccgatgaaaatcgtggaaattcaatcaaat
aatattcaagacgatttattccccacaaccaaaacgcaatctgtacccgaatttccccct
ttcaggctgcctgaaaattgccctgtttgtggcagcgcaatagaacgcgaagcaggtgaa
gcgatagcacgttgcacgggtggcatgatttgcaaagcacaacgcagccaaggacttatc
cacttcgccagccgcaaagccatggacattgttggtttgggagacaaacaaattgaagcc
ttggttacgcaagatattttgcatagttttgccgatatttatcaattggatattgaaaaa
ttgcagcaaatcaaagacagcaaatccagcgcaaccaaatgggcagaaaatattttgatt
ggtatcgaaaatagccgtaaacctttgttatcacgatttttatattcgctaggcattcga
cacgtcggtgaaagtaccgcaaaacagcttgccaatgcgtttggcgatttagcgaccgtt
cgccatgcgcccgagcctgtgttggcatgcttgcctgacattggcagtgtagtggcacat
tccatcgcgcattatttcaggcagcctgaacaacaaaaattgttggacgacttattgcga
ttcgttgaaccacaacatactgttttaacaattaatatatgcgactttgccaaaccagcg
cgttggttatcgcggctaccaagttacaaattaagcgaaaaacgggcgcaagaattgtgg
gatttagcaggcaattcggtagatggtttacttaccgatagagtattgccacgagaatgg
caagattggcgcaagattgccgaaaatgctgcacttttgcgcgaaattgatgaatcttta
acgaaatttgattcaaaacaaaacgaagcatattatttaccgctaggtacaggcagcctg
aaaagtgaaataacaggaaaaacctttgtattaacaggaactttaccaactttaaaacgc
gaagatgcagcagcaatgattgaagccgcaggtggtaaagtttcaggcagcgtgtccaaa
aaaaccgattttgtcgtggcaggtgaagcggctggttctaaattagaaaaggcgttgagt
ttaggcattactgtattgaatgaagatgagtttttggcaatgtttcaagctgattga
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