Serratia marcescens WW4: SMWW4_v1c16450
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Entry
SMWW4_v1c16450 CDS
T02448
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
smw
Serratia marcescens WW4
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smw03009
]
SMWW4_v1c16450 (rumB)
Enzymes [BR:
smw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SMWW4_v1c16450 (rumB)
Ribosome biogenesis [BR:
smw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SMWW4_v1c16450 (rumB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_11
Methyltransf_ANTKMT
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AGE17449
LinkDB
All DBs
Position
1807900..1809027
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AA seq
375 aa
AA seq
DB search
MHCALYTAGTCRSCQWLEKPYPQQLADKQHHLQSLLAGRDVAQWLQPVAGELSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLSDCPLYPAGFAPMFAVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTLDGGVMLRFVLRSETKLAQLRAALPWLQQQLPQLRVISANIQPVHMAIM
EGEREIALTEQQALEEQFNQVPLFIRPQSFFQTNPQVAADLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLLQVDFQALDSTRFATAEGQV
PQLVLVNPPRRGIGQALCDYLSRMAPDYILYSSCNAESMAKDIEMLPGYRIERVQLFDMF
PHTSHYEVLTLLVRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggaaaagccc
tatccgcagcaactggccgacaaacagcatcacctgcaatcgctgctggccgggcgcgac
gtcgcgcagtggctgcagccggtggcgggggaactgagcgcatttcgcaataaagccaag
atggtggtcagcggcagcgtggagcgaccgctgctcggcatgctgcaccgcgacggcacg
ccggtcgatctgagcgactgcccgctgtaccccgccggctttgcgccgatgtttgctgtg
ctgaaaagctttatcgcccgcgccggcctgacgccgtataacgtggcgcgcaaacgtggc
gagctgaaatacctgctgctgaccgaaagcacgctcgacggcggcgtgatgctgcgtttc
gtgctgcgctcggaaaccaaactggcacagctgcgcgccgcgctgccgtggctgcagcag
cagctgccgcagctcagggtgatctccgccaatattcaaccggtgcatatggcgatcatg
gaaggggagcgcgagatcgcgctgaccgaacagcaggcgctggaggaacagttcaatcag
gtgccgctgttcatccgcccgcaaagcttctttcagaccaacccgcaggtggccgccgat
ctgtatgccaccgcccgcgactgggtgcgcgcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtcggcggtttcggcctgcactgcgcgcagccgcagacgcgcctgaccggc
atcgaaatcagcgcggaggcgatcgcctgtgcgcgccagtcggcgcagcggttagggttg
ttgcaggtagattttcaagcgctcgattccacccgcttcgccaccgccgaaggccaggtg
ccgcagctggtgctggtcaatccgccgcggcgcggcatcggccaggcgctgtgcgactat
ttgagccggatggcgccggactatattctgtattcgagctgcaacgccgagagcatggcg
aaagatatcgagatgttgccggggtatcgcatcgaacgggtgcagctgttcgacatgttc
ccgcatacctcgcactacgaagtgctgacgctgctggtgcggcgttaa
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