Serratia marcescens WW4: SMWW4_v1c22640
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Entry
SMWW4_v1c22640 CDS
T02448
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMWW4_v1c22640 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c22640 (nth)
Enzymes [BR:
smw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SMWW4_v1c22640 (nth)
DNA repair and recombination proteins [BR:
smw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMWW4_v1c22640 (nth)
Prokaryotic type
SMWW4_v1c22640 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGE18065
LinkDB
All DBs
Position
complement(2443266..2443907)
Genome browser
AA seq
213 aa
AA seq
DB search
MNKQKRLEILTRLRDNNPHPTTELVYTTPFELLIAVLLSAQATDVSVNKATARLYPVANT
PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRMLLELHGGEVPEDRAALEALPGVGRK
TANVVLNTAFGWATIAVDTHIFRVCNRTHFAPGKNVDQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVYPES
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcagaagcgactggaaattctgacccggctgcgcgacaacaacccgcacccg
accaccgagctggtgtacaccacgccgtttgaactgctgattgccgtgctgctgtctgcg
caggccaccgacgtgagcgtcaacaaagcgaccgccagactttacccggtcgccaacacc
cccgccgccatgctggcgctgggggttgatggcgtcaaggagtacatcaagaccatcggc
ctgttcaacagcaaggccgaaaacgtgatcaaaacctgccgtatgctgctggagctgcac
ggcggcgaagtgccggaagatcgcgccgcgctggaagcgctgccgggcgtcggccgcaag
accgccaacgtggtgctcaataccgccttcggctgggcgaccatcgccgtggacacccac
atcttccgggtgtgcaaccgcacccacttcgcgccgggcaagaacgtcgatcaggtggaa
gagaagctgttgaaggtggtgcccgccgaattcaaggtcgattgccaccactggctgatc
ctgcacgggcgctacacctgcatcgcgcgcaaaccgcgctgcggctcctgcatcatcgaa
gacctgtgcgagtataaagagaaggtttatccggaatcctga
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