Serratia marcescens WW4: SMWW4_v1c43820
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Entry
SMWW4_v1c43820 CDS
T02448
Name
(GenBank) hypothetical protein
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00020
Citrate cycle (TCA cycle)
smw00270
Cysteine and methionine metabolism
smw00620
Pyruvate metabolism
smw00630
Glyoxylate and dicarboxylate metabolism
smw00680
Methane metabolism
smw00710
Carbon fixation by Calvin cycle
smw00720
Other carbon fixation pathways
smw01100
Metabolic pathways
smw01110
Biosynthesis of secondary metabolites
smw01120
Microbial metabolism in diverse environments
smw01200
Carbon metabolism
Module
smw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smw_M00012
Glyoxylate cycle
smw_M00168
CAM (Crassulacean acid metabolism), dark
smw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SMWW4_v1c43820
00620 Pyruvate metabolism
SMWW4_v1c43820
00630 Glyoxylate and dicarboxylate metabolism
SMWW4_v1c43820
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SMWW4_v1c43820
00720 Other carbon fixation pathways
SMWW4_v1c43820
00680 Methane metabolism
SMWW4_v1c43820
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SMWW4_v1c43820
Enzymes [BR:
smw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SMWW4_v1c43820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Sacchrp_dh_NADP
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AGE20169
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All DBs
Position
4736481..4737434
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AA seq
317 aa
AA seq
DB search
MKIVLLGFGGIGQETLNALLSTTERRGSVNEVVIICRNTEKYSAVCEDILDGLLAEALFS
RHNRTSLPKIVVTDDYRHIDGADVILCCYGVPSTFPMHDRQALLDDHVRLSEAIFSRAKP
FIAPGCHIINAVNPVDSISYYIDKILLDSRCRVIGIGAAHNTARLLKSICRISGIDMQRI
DARSLTVCGEHGAGLVPLLSQVTTDEGPLNQLLSAQALAQIVTDTRNQGLDIFHKMRRPP
KYGPAASILILLERIIQRDETPCCGSVWLPELGVFMSWPLALRDGVFTPLSLMPNQDEQQ
QIHQAALKLKNIIQGFS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgttttattgggattcggcggcattgggcaagagacgctaaacgcgctgtta
agtacgaccgagcgacgtggcagcgtcaatgaagtcgtgatcatctgccgaaataccgaa
aagtattcagccgtttgcgaagatattcttgatggcctgctggcggaagcgctcttctca
cgccataaccgaacgtctttacccaagattgttgtaacggatgactaccgccacatcgac
ggggctgacgtgatcctctgttgctatggcgtgccttcaacctttccgatgcatgaccgc
caggcgttgctggacgatcacgtacggctcagcgaggccatttttagccgagccaaaccc
ttcattgctcccggctgtcacatcatcaatgcggtcaatccggtggatagcatcagctat
tacatcgataaaatcctgctcgactctcgctgccgggtgataggcatcggcgccgcgcac
aacaccgccaggctgctgaaaagcatctgccgcatttccgggatcgacatgcagcgcatc
gacgcgcgtagcctgacagtctgcggcgagcacggcgccgggttggtgcccttgctcagc
caggtaacaaccgacgagggaccgctgaaccagctactttcggcgcaggcgctggcgcaa
atcgtcaccgatacccgcaatcaagggttggacatatttcacaaaatgcggcgccctcct
aaatatggcccggccgcctccattcttatcttgcttgagcgcatcatccaacgggacgaa
accccctgctgcggttcggtctggctgccggaactgggcgtgttcatgtcctggccgctg
gctctgcgcgacggcgtctttacgccgctgtcgctgatgcccaatcaggatgagcaacaa
caaatccaccaggcggcgctcaagttaaaaaacatcatccaaggttttagctga
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integrated database retrieval system