Stenotrophomonas maltophilia D457: SMD_1387
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Entry
SMD_1387 CDS
T02061
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD_1387 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_1387 (nth)
Enzymes [BR:
smz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SMD_1387 (nth)
DNA repair and recombination proteins [BR:
smz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMD_1387 (nth)
Prokaryotic type
SMD_1387 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCH11947
LinkDB
All DBs
Position
complement(1555813..1556505)
Genome browser
AA seq
230 aa
AA seq
DB search
MATAKKTARAPARRGGRMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQAT
DVGVNKATRRLFPVANTPAKILALGEDGLKPYIATIGLFNAKAKNVIATCAILLQKYGGE
VPRDREALEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVREVEDTL
VKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKEKTTAET
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgaagaagactgcccgcgcaccggcgcggcgcggcggccgcatgccgcgc
gccgacgtggtggaaatgttcacccgcctgcgcgagctcaatccgcacccgaagaccgag
cttgagtacagctcgccgttcgaactgctggtggccgtggcgctgtccgcccaggccacc
gacgtcggcgtcaacaaggccacccgccgcctgttcccggtcgccaacacgccggcgaag
atcctcgcgctcggtgaggatggcctgaagccgtacatcgccaccatcgggctgttcaac
gccaaggcgaagaacgtgatcgccacctgcgcgatcctgctgcagaagtacggcggcgaa
gtgccgcgcgaccgcgaagcgctggaagcgctgcccggcgtgggccgcaagaccgccaac
gtggtgctcaacaccgccttcggcgagccggtgatggcggtggatacgcatatcttccgc
gtctccaaccgtaccggcctggcccccggcaagaacgtgcgcgaagtggaggacacgctg
gtgaaggtgattccggccgagttcctgctcgacgcgcaccattggctgatcctgcatggc
cgctacgtgtgcaaggcgcgcaagccggattgcccgggctgcgtgatcgccgacctgtgc
cggttcaaggaaaagaccacagccgagacgtga
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