Spongiibacter nanhainus: I6N98_07145
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Entry
I6N98_07145 CDS
T07977
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
snan
Spongiibacter nanhainus
Pathway
snan01501
beta-Lactam resistance
snan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6N98_07145
01503 Cationic antimicrobial peptide (CAMP) resistance
I6N98_07145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snan03036
]
I6N98_07145
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snan02000
]
I6N98_07145
01504 Antimicrobial resistance genes [BR:
snan01504
]
I6N98_07145
Chromosome and associated proteins [BR:
snan03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
I6N98_07145
Transporters [BR:
snan02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
I6N98_07145
Antimicrobial resistance genes [BR:
snan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6N98_07145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
Beta-barrel_RND
YknX_C
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
HH_AAEA_pHBA
BSH_CzcB
BSH_YhbJ
HH_YBHG
HH_EMRA
CzcB_C
Biotin_lipoyl
BSH_LcnD
LptM_cons
Motif
Other DBs
NCBI-ProteinID:
QQD19616
UniProt:
A0A7T4R354
LinkDB
All DBs
Position
1579342..1580559
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AA seq
405 aa
AA seq
DB search
MRTDTRLLRRLPRLSLSMLAIVMMLAGCGEKLQTVAEERAVAVKALALSAHTLPIDLQYP
GRAEGSKEVEVRARVDGILLHRRYREGEKVEAGQLLFEIDAAPFEVALDRAKAHLAQTQA
ALSAAERRWGRAQELIKRDAISQRERDDTQSELEMAQADVKMARAEVKEAEINLGYTQVL
APIGGITSREEVSEGSLVGPGSVLAKITQLDPIWVNISIPDSELLSFRSMLNSGDLQFEE
ASRRAVVETANGYVHPHSGKVNFTESAVDRQTGTVQMRAAIPNPDGTLIPGQFVRVHLEG
LRSVNALAIPERAVMQNAQGSYVYRVVEGQRVQPAPVSLGLKTTAGVIVESGLESGDVIV
VEGLGRVRPGSLVEIQQAQDAEPQPERADKRKASGQASSDQGAGE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgacacacgattgctccgcagactgcctcggttgtcattaagcatgctcgcc
attgtcatgatgcttgccggctgcggcgaaaagttgcaaacggtggctgaagagagagct
gttgctgtaaaagcactagcattaagcgcacataccctgccgattgatctgcagtacccc
ggtcgagctgagggctcaaaggaagtggaagtgcgcgcccgggtagatggcatattgctg
caccgtcgctaccgggaaggcgaaaaagtcgaagcggggcagttgttatttgaaattgat
gccgcgccctttgaggttgcattggaccgggccaaagcgcatctggcgcaaactcaggcg
gctttatccgctgccgaacggcgctggggccgagcccaggagctgattaagcgggacgcc
atcagtcagcgcgagcgggatgacacccagtctgaactggagatggcgcaggccgacgtt
aagatggccagggccgaagtcaaagaggccgaaatcaacctcggttatacccaggtcctc
gccccgattggcggcattaccagcagggaagaggtttcagagggctcattggtggggccg
gggtcggtactggccaaaatcactcagctcgatccaatctgggtaaacatttctatcccc
gacagtgagttgttgagcttccgcagtatgctcaacagcggagatctgcagtttgaagag
gcctcgcgccgggccgtggtggaaaccgccaatggttatgttcacccccatagcggtaaa
gttaacttcaccgaaagtgctgtggatcggcaaaccggcacagtgcaaatgcgggcggcc
attcccaaccccgatgggacattaattcccggtcagtttgttcgcgtgcatcttgagggg
ctgcgcagtgtcaacgccctggccattcccgaacgagcggtaatgcagaatgcccaaggt
agctatgtttatcgcgtcgtagaaggtcagcgggtacaacccgccccggtctccttaggc
ttaaaaaccactgcgggggtgatcgttgagtcgggattggaatccggcgatgtcatcgta
gtagagggcttaggcagagtaagaccgggatcattggtggagattcagcaagcccaagat
gcggagccgcagcctgagagagcggataagcggaaagccagcggtcaggcgtcttcggat
caaggggctggggaatga
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