Sphingomonas naphthae: PQ455_01960
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Entry
PQ455_01960 CDS
T08850
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00300
Lysine biosynthesis
snap00550
Peptidoglycan biosynthesis
snap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQ455_01960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQ455_01960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snap01011
]
PQ455_01960
Enzymes [BR:
snap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PQ455_01960
Peptidoglycan biosynthesis and degradation proteins [BR:
snap01011
]
Precursor biosynthesis
Amino acid ligase
PQ455_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF6668
Motif
Other DBs
NCBI-ProteinID:
WCT74021
LinkDB
All DBs
Position
complement(389645..391090)
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AA seq
481 aa
AA seq
DB search
MRLGDLVEAAGIEVVPTGGALDGRVTGFAIDHRKVAPGTVFGAFRGLKFDGENFIDAAIA
AGAAAIVTRPEAQVTGAPHIADAEPRRAFAKLAAAFFKPFPATTVAITGTNGKTSTAELT
RQLWRLAGHSAASIGTLGVTTADDQVSTGLTTPDVVTFLANMAGLAREGVSHAAFEASSH
GLSQFRIEGLPVRAGAFTNLSRDHLDYHVTMEAYLEAKLRLFTEVVDRDGTAVVWADDAV
SARVAELARERGLGLITVGTKGETLRLVDREATQLGQTLTIEAEGRTHQVKLPLIGAYQA
ANALTAAGLVIATGGDVAATFANLARVQPVRGRLERAVISRAGAPVYVDYAHTPDGLEAA
IAALRPHARARLIVAFGAGGDRDKGKRPEMAAIAAKGAEVVIVTDDNPRTEDAAQIRRDV
LAGAPDATEIGDRRAAIAAAIGQAGADDIVLIAGKGHEQGQIVGDRVLPFDDVSVARECA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcggcgatctcgttgaggcggcaggcatcgaggtcgttcccaccgggggcgcc
ctcgacggccgtgtcaccggctttgcgatcgatcatcgcaaggtggcccccggcaccgtc
ttcggcgccttccgggggctgaagttcgatggcgagaatttcatcgacgccgccatcgcc
gccggcgccgcggcgatcgtgacccggcccgaggcgcaggtgacgggcgcgccgcacatc
gccgacgccgaaccgcgccgcgccttcgcgaagctggcggccgccttcttcaagcccttc
cccgccacgacggtcgcgatcaccggcaccaacggtaagacatcgaccgccgaactgacc
cgccagctgtggcggctggccgggcacagcgccgcctcgattggcacgctcggagtcacc
acggccgacgatcaggtctcgaccgggctgaccacgcccgacgtggtgaccttcctcgcc
aacatggcggggctcgcgcgcgagggggtgagccatgccgcgttcgaggcgtccagccat
ggcctgtcgcaattccgcatcgaggggctgccggtgcgcgccggcgccttcaccaacctc
agccgcgaccatctcgactatcatgtcacgatggaagcctatctggaggccaagctgcgc
ctcttcaccgaagtcgtcgatcgcgacggcacggcggtggtgtgggccgacgacgccgtc
tccgcccgcgtcgccgaactcgcgcgcgagcgggggctgggcctcatcacggtcggcacc
aagggcgagacgctcaggctggtcgaccgcgaggcaacccagctcggccagacgctgacg
atcgaggccgaggggcgcacccatcaggtgaagctgccgctgatcggcgcctatcaggcc
gccaatgcgctgaccgccgccggcctcgtcatcgccacggggggcgatgtcgccgcgacc
ttcgcgaacctcgcccgcgtccagccggtgcgcgggcggctggagcgcgcggtcatcagc
cgggcgggcgcgccggtctatgtcgattacgcccacacgcccgacgggctggaagccgcc
atcgccgcgctgcgcccccatgcgcgcgcccggctgatcgtggcgttcggcgcgggcggc
gaccgcgacaagggcaagcgccccgagatggccgccatcgccgccaagggcgccgaggtg
gtgatcgtcaccgacgacaacccccgcaccgaggatgccgcccagatccgccgcgacgtg
ctggcgggcgcgccggacgccaccgagatcggcgaccgccgcgcggccatcgcggccgcg
atcgggcaggccggcgcggacgatatcgtgctgatcgccggcaaggggcatgagcagggg
cagatcgtgggcgatcgggtgctgccgttcgatgacgtgagcgtggcgcgggagtgcgcg
gcgtga
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