Serratia nematodiphila: NLX84_22820
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Entry
NLX84_22820 CDS
T08619
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
snem
Serratia nematodiphila
Pathway
snem00270
Cysteine and methionine metabolism
snem00450
Selenocompound metabolism
snem00670
One carbon pool by folate
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01230
Biosynthesis of amino acids
snem04981
Folate transport and metabolism
Module
snem_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NLX84_22820 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NLX84_22820 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NLX84_22820 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NLX84_22820 (metH)
04980 Cobalamin transport and metabolism
NLX84_22820 (metH)
Enzymes [BR:
snem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
NLX84_22820 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UTO01151
LinkDB
All DBs
Position
complement(4801503..4805198)
Genome browser
AA seq
1231 aa
AA seq
DB search
MEGVTVTNRVEQLRRQLAQRILVLDGGMGTMIQSYRLDERDFRGERFADWRSDLKGNNDL
LVLTKPEVITAIHYAYLEAGADILETNTFNSTSIAMADYHMESLSAEINYQAACLARACA
DEWTARTPEKPRYVAGVLGPTNRTASISPNVNDPAFRNISFDELVAAYRESTRALVEGGV
DLIMIETIFDTLNAKAAAFAVETEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSL
RHVKPLTFGLNCALGPDELRQYVAELARISETYVTAHPNAGLPNAFGEYDLDAAEMARQV
GEWAQAGFLNIIGGCCGTTPEHIAAMAKAVEGVPPRRLPELPVACRLAGLEPLTIDANTL
FVNVGERTNVTGSARFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLDAEAAMVR
FLNLIAGEPDIARVPIMIDSSKWSVIEKGLKCIQGKGIVNSISMKEGEEAFIHHARLVRR
YGAAVVVMAFDEVGQADTRERKFEICRRAYKILTERVGFPPEDIIFDPNIFAVATGIEEH
NNYAVDFIEACADIKTHLPHAMISGGVSNVSFSFRGNDPVREAIHAVFLYHAIRNGMDMG
IVNAGQLAIYDDLPGELREAVEDVILNRREDGTERLLELAEKYRGSKDGEAAVQQAEWRG
WPVEKRLEYSLVKGITEFIELDTEEARQQAERPIEVIEGPLMAGMNVVGDLFGEGKMFLP
QVVKSARVMKQAVAYLEPYIEASKQQGASAGKILLATVKGDVHDIGKNIVGVVLQCNNYE
IVDLGVMVPTEKILRTAREENVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGAT
TSKAHTAVKIEQNYSGPTTYVQNASRTVGVVAALLSATQRDEFVARTRKEYETVRIQHAR
KKPRTPPVDLHKARANAMALDWADYQPPAPRQLGVFPVAAGIETLRHYIDWTPFFMTWSL
AGKYPRILEDEVVGEEAKRLFHDANQMLDRLAAERSLNPRGVYGLYPANRVGDDVEVYRD
EQRGEVLAVSRHLRQQTEKTDFPNYCLADFVAPKSSGKADYFGAFAVTGGLEEDALAAAY
DAQHDDYNKIMVKALADRLAEAFAEYLHEQVRKLHWGYAADENLSNEELIRENYQGIRPA
PGYPACPEHTEKATIWQLLDVKRHTGMELTESFAMWPGAAVSGWYFSHPESKYFAVAQIQ
RDQVEDYAARKGMSVSEVERWLAPNLGYDAD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggttacagtgacgaatcgagtagaacaactgcgccgccagttagcgcagcgc
attttggtgttggacggcggcatgggcaccatgatccagagctatcgcctggacgagcgc
gatttccgcggtgagcgtttcgccgattggcgcagcgatctgaaaggcaataacgatctg
ctggtgctgaccaagccggaagtgatcaccgccattcattacgcctatcttgaggcgggc
gccgatatccttgagaccaataccttcaactccacctccatcgccatggctgactaccac
atggagtcgctgtccgccgagattaactatcaggccgcctgcctggcgcgcgcctgcgcc
gacgaatggacggcgcgcacgccggaaaaaccgcgctacgtcgccggggtgctggggccg
accaaccgcaccgcgtccatctcgccgaacgtcaacgatccggcatttcgcaacatttcg
ttcgatgaactggtggcggcgtaccgcgaatcgacccgcgcgctggtggagggcggcgtc
gatctgatcatgatcgaaaccatcttcgacaccctgaatgccaaggctgccgcttttgcg
gtggaaaccgaattcgaagcgctgggggtggaactgccgatcatgatttccggcaccatc
accgacgcctccggccgcaccctgtccggccagaccaccgaagcgttttacaattcgctg
cgccacgtcaagccgctgaccttcggcctgaactgcgccctggggccggatgagctgcgt
cagtacgtcgccgagctggcgcgcatctcggagacctacgtcaccgcgcacccgaacgcc
ggtttgccgaacgccttcggcgagtacgatctggatgcggccgagatggcgcgccaggtc
ggggagtgggcgcaggccggcttcctcaatatcatcggcggctgctgcggcaccacgccg
gaacatatcgccgcgatggccaaggcggtcgagggcgtgccgccgcgccggctgccggag
ctcccggtcgcctgccgcctggccggtctggaaccgctgaccatcgacgccaacacgctg
ttcgtcaacgtcggcgagcgcaccaacgtcaccggttcggcacgtttcaagcgtttgatc
aaagaagagaaatacaacgaggcgctcgacgtggcgcgccagcaggtcgagagtggcgcg
cagatcatcgatatcaacatggacgaggggatgctcgacgccgaagcggcgatggtgcgc
ttcctcaacctgatcgccggcgagccggatatcgcccgggtgccgatcatgatcgactcc
tccaagtggtccgttatcgagaaaggcctgaagtgcattcagggcaagggcatcgtcaac
tcgatctcgatgaaggagggcgaagaggcctttatccaccacgcccggctggtgcgccgc
tatggcgccgcggtggtggtgatggcgttcgacgaagtgggccaggcggacacgcgcgag
cgcaagttcgagatctgtcgccgtgcctataaaattttgaccgaacgcgtcggtttcccg
ccggaagacatcattttcgacccgaacatcttcgccgtcgccacgggcatcgaagagcac
aacaactacgccgtcgactttatcgaagcctgcgccgacatcaaaacccacctgccgcac
gcgatgatctccggcggcgtgtctaacgtgtcgttctcgttccgcggcaacgatccggtg
cgcgaggcgatccacgcggtgttcctgtatcacgccattcgcaacggcatggacatgggc
atcgtcaacgccgggcagctggcgatttacgacgatctgcctggcgagctgcgcgaggcg
gtagaagacgtgatcctcaaccgtcgcgaggacggtaccgaacgcctgctggagctggcg
gaaaagtaccgcggcagcaaagacggcgaagcggcggtgcagcaggcggagtggcgcggc
tggccggtggagaagcggctggaatattcgctggtgaagggcatcaccgagtttatcgaa
ctggacaccgaagaggcgcggcagcaggccgaacgcccgatcgaagtgatcgaggggccg
ctgatggcggggatgaacgtggtcggcgatctgttcggcgagggcaagatgttcctgccg
caggtggtgaaatccgcccgcgtgatgaagcaggcggtggcctacctggaaccgtacatc
gaggccagcaagcagcagggcgcctccgcggggaaaatcctgctggcgacggtgaagggc
gacgtgcacgacatcggcaagaacatcgtcggcgtggtgctgcagtgcaacaactatgaa
atcgtcgatctgggcgtgatggtgccgacggagaaaatcctgcgcaccgcgcgcgaggag
aacgtcgacatcatcggcctgtcggggctgatcacgccgtcgctcgacgagatggtcaac
gtggccaaagagatggagcgccagggctttacgctgccgctgctgatcggtggcgccacc
acctccaaggcgcacaccgcggtgaaaatcgagcagaactacagcggcccgaccacctac
gtgcaaaacgcctcgcgcaccgtgggcgtggtggcggcgctgctgtccgccacccagcgc
gatgagtttgtggcgcgcacccgcaaagagtatgaaacggtgcgcattcagcacgcgcgc
aaaaaaccgcgcacgccgccggtcgatttgcacaaggcgcgcgccaacgccatggcgctg
gactgggccgattatcagccgccggcgccacggcagcttggcgtcttcccggtggcggcc
ggcatcgagacgctgcgtcactacatcgactggacgccgttcttcatgacctggtcgctg
gcgggcaaatacccgcgcatcctggaagacgaggtggtgggggaagaggccaagcgcctg
ttccacgacgccaatcagatgctggatcggttggccgccgagcgcagcctcaacccgcgc
ggcgtttacggcctgtacccggccaaccgcgtcggcgacgacgtggaagtgtaccgcgac
gaacagcgcggcgaggtgctggcggtgagccgccatctgcgccagcagacggaaaaaacc
gacttcccgaactattgtctggcggactttgtggcgccgaaaagcagcggtaaggccgac
tacttcggcgccttcgcggtgaccggcgggctggaggaggacgcactggccgcggcgtac
gacgcacagcacgacgattacaacaaaatcatggtcaaggcgttggcggatcgtctggcg
gaggctttcgctgaatacctgcacgaacaggtgcgcaagttgcactggggttatgccgcc
gacgagaacctgagcaacgaagagctgatccgcgaaaactatcagggcatccggccggcg
ccgggctacccggcctgcccggagcacaccgaaaaagcaaccatctggcagctgctggac
gtcaagcgccacaccggcatggaactgacggagtccttcgccatgtggccgggggcggcg
gtgtccggctggtacttcagccatcctgagagcaagtacttcgcggtggcgcagatccag
cgcgatcaggtggaagactatgcggcgcgtaaagggatgagcgtgagcgaggtcgaacgc
tggctggcgccaaacctcggctacgacgccgactga
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