Serratia nematodiphila: NLX84_23170
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Entry
NLX84_23170 CDS
T08619
Name
(GenBank) pyridoxal phosphate-dependent aminotransferase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
snem
Serratia nematodiphila
Pathway
snem00270
Cysteine and methionine metabolism
snem00450
Selenocompound metabolism
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01230
Biosynthesis of amino acids
Module
snem_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NLX84_23170
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NLX84_23170
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snem01007
]
NLX84_23170
Enzymes [BR:
snem01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
NLX84_23170
Amino acid related enzymes [BR:
snem01007
]
Aminotransferase (transaminase)
Class II
NLX84_23170
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UTO01215
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Position
complement(4856496..4857668)
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AA seq
390 aa
AA seq
DB search
MTSHFNAIIDRHNTGSVKWDFIDRYLQLDGSELLPMWVSDFDFPCPPEVQQALHQRVDHG
VFGYSERDDAYYQAAIDWFAKRHDLPLRREWFTSIEGVVPGLAMLIQLLSKPGDGVVVQG
PYYGSFAKIVTMNGREVIENPLLETPQGYRIDFDQLAACLAQRKPPLLLLCNPHNPTGRC
WRREELERLMAICHAHDVTVISDEIWADLLLPGETFTSVLHLDEEYRERVIAATSASKTF
GLSSLRISNFLIPNARLRQAFVDRLNAHGLDVFNALSMTAATVAYQRGAAWLDELLDYLA
ENRRWFEQALAAAAPWCTMTQAEGTYLAWLDCRSLGLNDADLQQALVAVAKLAPSMGSGF
GPQGSGFIRINLGCPRRYLERAVDGLARLK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcatttcaacgccatcatcgatcgccacaataccggctccgtgaagtgggac
ttcatcgaccgctatctgcaactggacggcagcgaattgttgccgatgtgggtgtccgat
ttcgactttccatgcccgccggaggtgcaacaggcgctgcatcagcgggtggaccacggc
gtctttggctacagcgaacgcgacgacgcctactaccaggcggcgatcgactggtttgcc
aagcggcacgacttgccgctgcggcgcgagtggttcacgtcgattgaaggggtggtgccg
gggttggcgatgctgatccaactgctcagcaagccgggggacggcgtggtggtgcagggg
ccgtactatggctcgttcgccaagatagtcaccatgaacggcagagaggtgattgaaaat
ccgctgctggaaaccccgcagggataccggatcgatttcgaccagctggccgcctgcctg
gcgcagcgcaaaccgccgctgttgttgctgtgcaatccgcacaatccgactggccgttgc
tggcgccgcgaggaactggagcggctcatggcgatctgccacgcccacgatgtcacggtg
atctccgatgaaatttgggccgatctgctgctgcccggcgagacgtttacatcggtgttg
catctggacgaggaatatcgcgagcgggtgattgcggcgacgtccgccagcaaaaccttc
ggactctcttcgctgcgcatttcgaattttctgatccccaatgcccggctgcggcaggcg
tttgtcgatcggctgaacgcccacgggctggatgtattcaacgcgctgtcgatgacggcg
gcgaccgtggcctatcaacggggcgctgcctggcttgatgagctgctcgactacctggcg
gagaatcggcgctggtttgagcaggcgctggcggccgccgcgccctggtgcacgatgacc
caggctgaagggacttatctcgcctggctggattgccgctcgctgggtttgaacgatgct
gacttacagcaggcgctggtggcggtggcgaagctggcgccgtcgatgggcagcggtttc
ggcccgcaggggagcggttttatccgcatcaacctggggtgcccgcgccgctatctcgag
cgtgccgtcgacgggttggcacgcctgaaataa
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