Streptomyces nojiriensis: JYK04_02987
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Entry
JYK04_02987 CDS
T07326
Name
(GenBank) Bifunctional protein
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
snf
Streptomyces nojiriensis
Pathway
snf00860
Porphyrin metabolism
snf01100
Metabolic pathways
snf01240
Biosynthesis of cofactors
snf03030
DNA replication
Module
snf_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JYK04_02987
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYK04_02987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snf03032
]
JYK04_02987
Enzymes [BR:
snf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
JYK04_02987
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
JYK04_02987
DNA replication proteins [BR:
snf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
JYK04_02987
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
QTI45204
LinkDB
All DBs
Position
complement(3191908..3193227)
Genome browser
AA seq
439 aa
AA seq
DB search
MPQFVVEADGGSRGNPGPAGYGAVVLDPATGETLAERAEYIGVATNNVAEYKGLIAGLTA
ARDLASDAQVLVRMDSKLVVEQMSGRWKIKHPDMKPLAAEAARILPRAQVTYEWIPREQN
KHADRLANEAMDAGKRGRQWEPSASTAALDHGAARALATPPAPAGPPGDAAKGAAAVRAA
LVASSGAAATTAQELADTLFADAETLADAIEPCLDADAPAVASGTHGWGPDMGAPATFVL
LRHGETALTPQKRFSGSGGSDPELSPAGHRQAAAVAEALAVRGTIQTVISSPLLRCRETA
HAVADRLGLTVTVEEGLREVDFGAWEGLTFAEVQQRFPDDLQAWLDSPKAAPTGGGESFM
SATRRISATRDRLLSAHAGRTVLLVTHVTPVKILVRLALGAPPEALFRMELSAASLSAVA
YYADGNASVRLLNDTSHLR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagtttgtcgtggaggcggacggcgggtcccggggcaacccggggccggccggc
tacggcgctgtggtgctcgacccggcgacgggcgagacgctggccgagcgtgccgagtac
atcggcgtcgcgacgaacaacgtggccgagtacaagggcctgatcgccgggctcacggcg
gcccgcgacctggcgtccgacgcgcaggtcctggtccggatggactcgaagctggtcgtc
gagcagatgtcgggccgctggaagatcaagcacccggacatgaagccgctcgcggccgag
gccgcgcggatcctgccgcgcgcccaggtgacgtacgagtggatcccgcgcgagcagaac
aagcacgcggaccggctcgcgaacgaggccatggacgcgggcaagcgcggcaggcagtgg
gagccgtcggcgtccacggccgccctcgaccacggcgcggcgcgcgccctggccaccccg
ccggcgccggccggcccgccgggggacgcggcgaagggcgccgcggccgtccgcgcggcg
ctggtcgcctcctccggagccgcggccacgaccgcccaggagctcgccgacacgctgttc
gccgacgccgagaccctggcggacgccatcgagccctgcctcgacgccgatgccccggcg
gtcgcctcgggcactcacggctggggcccggacatgggggcgccggccaccttcgtgctg
ctgcggcacggcgagaccgccctcaccccgcagaagcgcttctccggcagcggcggcagc
gaccccgaactgtccccggccggccaccggcaggccgccgccgtggccgaggcgctcgcc
gtccgcggcaccatccagacggtcatcagctccccgctgctccgctgccgtgagaccgcc
cacgcggtcgcggaccgcctcggcctcaccgtgacggtcgaagagggcctgcgcgaggtg
gacttcggggcatgggaggggctgaccttcgccgaggtgcagcagcgcttcccggacgac
ctccaggcctggctggactccccgaaggcggcccccacgggcggcggcgagagcttcatg
tccgccacccgccggatctcggccacccgcgaccgcctgctgtccgcccacgcgggccgc
acggtcctgctggtcacccacgtgaccccggtcaagatcctggtccggctggcgctggga
gccccgccggaagccctgttccgcatggagctctcggcggcctccctctcggcggtggcc
tactacgcggacgggaacgcctcggtccgtctcctgaacgacacgtcccacctgcggtag
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