Simkania negevensis: SNE_A02120
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Entry
SNE_A02120 CDS
T01559
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sng
Simkania negevensis
Pathway
sng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNE_A02120 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A02120 (nth)
Enzymes [BR:
sng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SNE_A02120 (nth)
DNA repair and recombination proteins [BR:
sng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SNE_A02120 (nth)
Prokaryotic type
SNE_A02120 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
DUF3349
Motif
Other DBs
NCBI-ProteinID:
CCB88089
UniProt:
F8L5U7
LinkDB
All DBs
Position
gsn.131:complement(220829..221443)
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AA seq
204 aa
AA seq
DB search
MNKKQRAAFVQKTLNHYFPKTPIPLKHTSAYTLLIAVLLSARCTDKRVNEITPKLFAKAS
TPKAMAALPVQTIQAIIKPCGLSPTKAKNIKKLSEILLEDYGSQVPKELEELEKLPGVGH
KTASVVVAQAFKQPAFPVDTHIHRCAKRWGLSSGKNVKQTEKDLKALFPKKSWRKLHLQI
IYFGRAFCMARAHKVSECPICSQL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacagcgtgctgcattcgtccaaaaaacgctcaatcattactttcccaag
actccgattcccctgaaacacacgagcgcttacacccttttaattgccgttctcctttct
gcccgctgcaccgataagcgggtgaatgagatcacccccaagctctttgctaaagcttca
actcccaaagcaatggcagcccttcctgtacaaaccatccaagcgattatcaaaccgtgt
gggctctctcccaccaaagcaaaaaacatcaaaaagctgtcagaaattctcctcgaagat
tatggaagccaagtccccaaagagctcgaagagttagagaaattgcctggcgtagggcat
aaaacagcatcggttgtcgttgctcaagcgtttaagcagccagcctttccagtcgacacc
catatccatcgttgcgccaaaagatggggattgagctcaggaaaaaatgtcaaacaaaca
gaaaaggatttgaaagctctttttccaaaaaaatcttggcgtaaacttcatttgcaaatc
atctactttggccgcgccttctgcatggcacgcgctcacaaagtctcagaatgcccgatt
tgcagccaattatga
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