Salvelinus namaycush (lake trout): 120017384
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Entry
120017384 CDS
T07522
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120017384 (ret)
04020 Calcium signaling pathway
120017384 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120017384 (ret)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120017384 (ret)
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
RET family
120017384 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
120017384
NCBI-ProteinID:
XP_038816062
UniProt:
A0A8U0P0M4
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Position
Sna22:complement(8665551..8695132)
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AA seq
1112 aa
AA seq
DB search
MGQTCGFSVGNIVLVLLLLCEGSAGLYFPQNQYKETVYVGQSAGTPVLQVHAMVESDSQR
PHFYLCYLRPPTYAPWFHLDETTGILSMNKTLEWSDFDSAYKFWKLPLSVIAATRPLKKF
LCGLSHPTVQVSLTFINDTAPPCGQTRPELKKLCFPDKDLSSHIKENRFPGALRQLRQLT
RLNVCPNYTISYSVESDVPAPFAVTENTTELVVTAPLDREERETYSPMLICTVQTDTMID
TFFVTLHINVYDEDDNAPYVSGTGTEDVVLEFDRKQGSSFGNLVVYDRDTTPRYPKSQSQ
NRFVGNVMTNDSWIDEMFAIEYSFKEEKAIFGNVRGTVHEFRLALKKNLSVTENRTFQLD
YLVNDTTYPRPEGTVMLHYNITILPVPIHFTNVTYLFGLTRRANVYSQVGRICVDNSLKF
QGINVTYRLAVAEKTENVSDDVQSCYAAISIAQSLKDMVGVLYVNDTEALRRPECQDLQY
VVIAQEQQNLLQASTQILIVLDSDIDKQGLEDQRFLSCAKGRQRGDCENIRGLGATTGRC
QWRQGSAKGISESYSTCSPDLRTCPDGFCDAVESKDASICPQDCTLEPVIGGHEKGIMSG
IRAGHGTCYCYSEKCFCEKDDVEEAMCDEVCKTIIATAVLLSFIVSILLSSYFIHRYHKN
SPKPPITSAEMTFRRPAQSYPISYSANNMRRGSLDSMENQVAIDTFKIPEDPKWEFPRKN
LVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKDHASHSELRDLLSEFTLLKQVN
HPHVIKMYGACSQDGPMYLIVEYAKYGSLRNFLRESRKVGPSYMSGNDANRNSSYLENPD
ERALTMGDLISFTWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN
LLKTGYRMEKPENCTEEMYNLMLRCWKQESNKRPIFIDISKELEKMMVKNRDYLDLAAST
PADTLLYDDALSEEDTPLVDSNNAPLPRTIPSTWIENKLYGMSYPNWPEKSPVLLNRLDA
TNPVFTRYANDSVYANWMALPSPAKIVDKLDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacgtgtggtttctctgtgggaaacatcgttttggtcctcctgctgttgtgt
gaagggtcagctgggctctacttcccccagaatcagtacaaggagactgtgtacgtcggg
cagtctgcagggacacccgtgctccaggtccacgccatggtggagagcgactctcaacgg
ccccacttctacctgtgctacctgaggcctccaacctatgccccgtggttccacctggac
gagaccacagggatactctccatgaataagaccctggagtggagcgactttgactctgca
tacaagttttggaagctgccgctgagtgtcattgctgcgaccagaccattgaagaagttc
ctctgtggcctcagccaccccaccgtacaagtcagcctgaccttcatcaatgacacggcg
ccaccgtgtggccagaccagaccagagctgaagaaactatgcttccctgacaaagacctg
agctcccacattaaggagaacaggttccccggggccctccgccagctcagacagctcacc
aggcttaacgtctgccccaactacaccatctcctacagtgtagaatccgatgttccagcc
ccattcgctgtgactgaaaacaccactgagttggtagtgactgccccattggaccgcgag
gagagggagacatacagtcccatgctgatctgcacagtgcagactgacacgatgatagac
accttttttgttacactgcatatcaacgtctacgacgaggacgacaatgcaccttatgtc
agtggaacaggcacagaggacgtggtgctggaatttgatcgcaagcagggaagttctttt
ggcaacttggttgtctatgatagagacacaacacccaggtatcccaaatcccagagtcag
aacagatttgtcggaaatgtgatgaccaatgactcatggatagatgaaatgttcgccata
gagtactctttcaaagaagagaaggccatttttggcaacgtccgaggcactgttcatgag
ttccggcttgcactgaagaagaatttgtctgtaaccgagaataggaccttccagctggat
tacctggtcaatgacactacatacccccgtccagagggaactgtgatgctgcactacaat
atcaccatcttacctgtccccatccacttcaccaatgtgacgtacctcttcggcctaaca
cgtagagctaatgtctactcccaggtcggtaggatttgtgtggacaacagcctgaagttc
cagggcatcaatgtcacataccggctagcagtagcagagaagacagagaatgtgtccgac
gacgtacagtcatgctacgctgcgattagcattgcacagagcctcaaggacatggtgggg
gtgctatatgtgaacgacacagaggcgcttcgcaggccagagtgccaggacctgcagtat
gtggttattgctcaagagcaacagaatctgctgcaggctagcactcagatcctcattgtg
ctcgatagcgatattgataagcagggcctagaggaccagcggttcctctcctgtgcaaag
ggaagacagcgtggggattgtgagaacatcagaggcctgggggcaaccacagggaggtgc
caatggagacagggctctgcaaaaggaatatcagaaagttattccacctgctcccctgac
ctccgcacgtgccctgatggcttttgtgatgcagttgaaagcaaagacgcatcaatttgt
cctcaggattgtacacttgaacccgttataggtggtcatgagaagggcatcatgtctggc
attagagctggccatggaacctgctactgctactctgaaaaatgcttctgtgagaaggat
gatgtagaggaggccatgtgtgacgaggtctgcaagaccatcattgccaccgccgtgctg
ctctccttcatcgtctccatcctcctgtcctcctacttcatccatcgttaccacaagaac
tcccccaagccgcccatcacctcggctgagatgactttccggcggcccgcacaatcctac
ccaatcagctactccgctaacaacatgcgccgcggctcgttggactccatggagaaccaa
gtagccattgacaccttcaaaatacccgaggatcccaaatgggaatttccacgcaaaaac
ctggtgctgggcaaaacgttaggagaaggggagtttgggaaggttgtcaaggcgactgca
ttccggctgaaaggaaaggctggttacaccacagtagctgtgaaaatgcttaaagaccac
gcctcacatagtgaactgcgggacctcctgtcagaattcaccttactgaagcaagtcaac
catccacacgtcatcaagatgtacggagcctgcagccaggatggtccaatgtatctgatt
gtagaatatgccaaatatgggtcactgcgcaacttcctgcgtgagagccgaaaggtggga
cccagctacatgtcaggcaacgatgccaaccgcaactcgagctacctggagaatccagat
gagagggcactcaccatgggcgacctgatctccttcacctggcagatctccaggggcatg
cagtacctggctgaaatgaagcttgttcacagggacctcgctgcaagaaatgtcctagtt
gcagagggccgtaagatgaagatttcagactttggtttgtcccgggacgtgtatgaggaa
gactcatatgtgaagaggagcaagggtcgaatcccagtgaaatggatggcaatagaatcc
ttgtttgatcacatttacacaacacaaagtgacgtctggtcctttggtgtgctgttgtgg
gagattgtgacactgggtggaaacccgtacccaggcatcgcccctgaacgcctatttaac
ctcctcaagactggctacaggatggagaaaccagagaactgtactgaggaaatgtataat
ctgatgcttcgatgctggaaacaggagtcaaacaaaaggcccatattcatagacatcagc
aaagaactggagaagatgatggtgaaaaaccgggattacctggacctggcagcgtctacg
ccagccgacaccctactgtacgacgacgccctctccgaagaggacacgcccctagtggac
agcaataatgcccctctccctcgaaccattccctccacatggattgaaaacaagctctat
ggcatgtcatacccgaactggcctgagaagagcccggtactgctcaacagacttgatgcc
actaacccagtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttg
ccttcacccgcaaaaattgtggacaagcttgatagttaa
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