Salvelinus namaycush (lake trout): 120018396
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Entry
120018396 CDS
T07522
Name
(RefSeq) fukutin-related protein-like
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00515
Mannose type O-glycan biosynthesis
snh01100
Metabolic pathways
Module
snh_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
120018396
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120018396
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120018396
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120018396
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120018396
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
TauE
Motif
Other DBs
NCBI-GeneID:
120018396
NCBI-ProteinID:
XP_038817500
UniProt:
A0A8U0P399
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Position
Sna23:38055450..38060492
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIVLNLLILYYVSRAQQQMMEKRRDPGRGSRKAALPASGLGGGMGSLV
GVGGGMVGPGGVGGEGNSRGPRVTVLLREFEDFENYVGDVARSFLHQRPELPFLAVSDTP
PYPPLSLPEGAHLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVAAPVLARSAVQCLHLRVSLREWTATYTPAASGSSGSVCTALQGDAVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPCFSASHRPLFSSAHNQWKADSHL
KEATSRLMRNFGLKRLLLADGKEQWHGCGKEMARCFGTVRDDTPEYLYLDRWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWMEHKQDVEF
PEHFLQPLVPMPFAGVTAYSPNNHRAFLELKFGEGVIENPQYPNPTKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccattgttctgaacctgctcatc
ctctactatgtgtcccgagcccagcagcagatgatggagaaacgccgggacccaggaagg
ggctccaggaaggctgctttacctgcgtccgggctggggggcggcatggggagcctggtg
ggggttggcggggggatggttggccctggaggtgtcgggggagaggggaacagccgcggc
ccccgtgtgactgtcctcctacgggagtttgaggactttgagaactacgtcggtgatgtg
gcacgctccttcctgcaccagagacctgagctgcccttcttggctgtgtctgacaccccg
ccctatccccctctgtctctccccgagggggcccatctcctggtgctctcccccagccca
gagcagcctccacaggcccaccggccagagttccacgtccagaccgagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgggctgtggagaggctgatccgggagctg
gagggggaaggtggggggcccgtgaggctggtggcggcccccgtgttggcacgctcggcc
gtccagtgcctgcacctgcgggtcagtctgagagagtggacagccacctacacccctgcg
gcgtctgggagcagtggtagcgtgtgtacagcccttcagggggacgcggtggtcctcatc
cgctccgaggacctcttcaacctgtctgtcccactggggaggcccttgctgccctcgctc
ttcatccagacctccctgcatggctggaaggtcaagctcctggagagcccctgcttctcc
gccagccaccggcctctcttcagctcagcccacaaccagtggaaggcagacagccatctg
aaggaggccactagccggctgatgaggaactttgggctgaagcgtctcctactggctgat
gggaaggagcagtggcacggctgtgggaaggagatggcgcgttgcttcggtacggtccga
gacgacacccctgagtacctgtacctggatcgctggacccctccatgctgcctccgcgca
ctacgtgagaccaccaagtatgtgatcaacatcctggagagctccggggtgcgctactgg
ctggaaggaggctccctgctgggggcggcccgccaccaggacatcatcccctgggactat
gacgtggacctgggcatctacctggaggacgtgcccaactgtgactacctgaagaacctg
gactctggttctctggtggacgctaacggctatgtgtgggagcgggcagtggagggggac
ttctatagggtgcaatacagcgaggctaaccacctccacgtggacctgtggcccttctac
ccgcggaacggcgtcatgaccaaagacacgtggatggagcacaagcaggatgtggagttc
cccgagcacttcctgcagccgctggtgccaatgccgttcgccggcgtcaccgcctacagc
ccgaacaaccaccgcgccttcctggagctcaagttcggggagggggtcatcgagaacccc
cagtaccccaaccctaccaagaagaggctggacaggagccggctgtga
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