Salvelinus namaycush (lake trout): 120018858
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Entry
120018858 CDS
T07522
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120018858
Peptidases and inhibitors [BR:
snh01002
]
Metallo peptidases
Family M10
120018858
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Peptidase_M66
Reprolysin_5
Peptidase_M54
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
120018858
NCBI-ProteinID:
XP_038818006
UniProt:
A0A8U0P2T5
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Position
Sna23:complement(17453707..17457599)
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AA seq
409 aa
AA seq
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MQAKIREMQSFFNLQVTGSLDANTLELMSMARCGVPDVGEYNHFPRHLKWQNTNVTFRIV
NYTPDLKKADVDRAIRNAFNIWADVTPLTFKKLHEGKADIMIAFGTKEHGDFNPFDGPDG
LLAHAYPPGRDIGGDTHFDEDEHWSKDSDAYNLFLVATHEFGHALGLSHSSDPGALMYPV
YSYSEGYPLSEDDVTGIQALYGQCPNPNHRKVKPKPDAPNKCDPMLSFDAVTELRGETII
FKDRFYWRLHPQFAEPEQTLIKSTWPSLPNKVDAAYEYPEKDMVFIFSGIRMWALNGYSL
VEGYPKYIHQLGLPKAVRRVDAAVYIPDTGKTLLFSEEQFWSYDEKTNTMDSGFPRSIEM
DFPGMAEEVDAALYKYGYLHFFHEHTQFEYSYSARKVIQIVRTNSFLNC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctaagatcagggagatgcagtccttcttcaacctccaagtgacagggagcctg
gacgctaacaccctggaactgatgagcatggccaggtgtggtgtccctgacgtgggggaa
tacaaccacttcccccgacacctcaaatggcagaacaccaatgtgaccttcagaatagtg
aattatactcctgatctgaagaaggcagatgtggacagagctatccgtaatgccttcaac
atctgggctgacgtcactcctctgaccttcaagaaactgcacgaggggaaggctgacatc
atgatagcatttgggacaaaagaacatggagacttcaacccttttgacggccctgacggt
ctcttagcccatgcctatccccctggcagagacattggaggagacacacactttgatgaa
gatgaacattggtcaaaagactcagatgcctacaaccttttcctggttgccactcatgag
tttggccatgctcttggcttgtcccattcttctgatcctggagctctgatgtacccagtc
tactcctacagcgagggctatccattgtctgaggatgatgtcaccggcattcaagctctt
tatggtcagtgcccgaaccccaatcacaggaaagtgaagcccaaaccagatgccccaaac
aaatgtgaccccatgttgagttttgatgctgttactgagctcagaggagaaacaatcatc
ttcaaagacaggttctactggcgtctccatcctcagtttgcagagcctgagcaaaccctg
atcaaatccacctggccctccctccccaacaaagtggatgctgcctatgagtaccctgag
aaagacatggtcttcatattcagtggtattagaatgtgggccctgaacggctacagccta
gtggagggctacccaaaatacatccatcaactgggactccccaaggccgtgcggagggtg
gatgctgctgtgtacatcccagacaccggcaagacccttctgttctctgaagagcagttc
tggagttatgatgagaagactaacacaatggacagtggcttcccaagatccattgagatg
gatttccctggaatggcagaggaggtggatgctgccttatataaatatggatatttgcat
ttcttccatgaacatacacagtttgaatacagttacagtgcaaggaaggtcattcagatt
gttaggacaaactcttttctcaactgctga
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