Salvelinus namaycush (lake trout): 120018876
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Entry
120018876 CDS
T07522
Name
(RefSeq) homeobox protein otx5-like isoform X1
KO
K09337
cone-rod homeobox protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120018876
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120018876
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
120018876
NCBI-ProteinID:
XP_038818023
UniProt:
A0A8U0P3M3
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Position
Sna23:32095203..32097527
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AA seq
300 aa
AA seq
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MMSYIKQPHYAVNGLTLSGPGMDLLHSAVGYPRPWCVCILDIPRKQRRERTTFTRAQLDI
LEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQQSTGQSKPRPPKKK
ASPAREANSEASVNTNGSYSPAPLPLGTAITPSSSSANATVSIWSPASISPLPDPLSAST
TPCMQRSSAYPMTYTQAPAYTQSYAGSSSYFTGLDCSSYLSPMHSQLSATGGALSPITSM
GGHLSQSPSLSSQGYTAASLGFGAVDCLDYKDQAASWKLNFNAADCLDYKDQNSWKFQVL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgccgtgaacgggttaactctgtctggcccg
ggcatggatctactacactctgccgtcggatacccaaggccatggtgtgtgtgtatttta
gacatccccagaaagcagcgtcgggaaaggaccacgtttacgcgcgcgcagttggacatc
ctggaggcactgttttccaagacgcgctaccccgacatcttcatgagagaagaagtggcc
cttaagatcaacctaccagagtctcgtgtacaggtatggttcaagaaccgccgtgctaaa
tgccgccagcaggcgcagcagagcacgggccagtctaaacctcgtccacccaagaagaag
gcctctccagcccgggaggccaactctgaggccagtgtcaacaccaacgggtcctacagt
ccagcaccgcttccccttggcaccgccatcacccccagctccagcagtgccaacgcgacc
gtgtccatttggagccctgcctccatctccccgctgccagatccactgtcagcctccacc
acgccctgcatgcagcgctcctctgcctaccccatgacctacacccaggccccggcctac
acccagagctacgcaggctcatcctcctacttcactggcctggactgcagctcctacctg
tctcccatgcactcacagctctccgccacagggggcgccctcagccccatcacctctatg
ggcgggcacctaagccagtccccctctctgtcctcacagggctacacagccgcctcgctg
ggcttcggggccgtcgactgcctggactacaaggaccaagctgcctcctggaaactcaac
ttcaacgcagctgactgcctggactacaaagaccagaactcctggaagtttcaggtcttg
tag
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