Salvelinus namaycush (lake trout): 120019198 Help Entry 120019198         CDS       T07522                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism snh  Salvelinus namaycush (lake trout) Pathway snh04115   p53 signaling pathway snh04145   Phagosome snh04148   Efferocytosis snh04350   TGF-beta signaling pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120019198   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120019198  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120019198    04148 Efferocytosis     120019198   09143 Cell growth and death    04115 p53 signaling pathway     120019198   09144 Cellular community - eukaryotes    04510 Focal adhesion     120019198   09142 Cell motility    04820 Cytoskeleton in muscle cells     120019198  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:snh04131]     120019198   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120019198 Membrane trafficking [BR:snh04131]  Endocytosis   Phagocytosis    Opsonins     120019198 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120019198 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  120019198 NCBI-ProteinID:  XP_038818436 UniProt:  A0A8U0P5T5 LinkDB All DBs Position Sna24:34764077..34785921 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVQTDEI VLIDDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELRGLGVVVKELSNELRK VTDENTFLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPAPKYGGKECQGDSKAS QQCNKNACPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPTRYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADLMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDIGDRCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTTGQVKTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctgttgatgctttggacctgcgagagcgtacgagtt gcagagaaccgagacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagttccttcagggacctcatcgattcc atccatgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacggatcaggagccgtgttcgagatagtctcg aatggaaaagcgaacaccctggatgtggttttctccaccgttaataagcaacaggtggtc tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgcgcgcagctgtatgttggctgtgaggaggtgaacacggctgaattggacgct cccatccagagcatcctcactcaggagactcccgccacagcgcgcctcaggatcgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgtgcgctttgtttttggaacc actttggacgcgattctgcgcaacaagggatgccaaaactctgttcagactgatgagatc gtccttatcgacgacaccatcaatgggtccagccctgccattaggacggactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggagctgagggggttgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggatgagaacacgtttttgatgaacagagttgggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgtaccgagtgc acttgtcaaaactctgccaccgtgtgccgtaagatctcctgccccctgatcccttgtgcc aacgcaaccgtgcccgatggagagtgctgcccgcgctgtggaacaccgagcgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcggggc atccagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcatgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagagggg agacagactgagaagtgcaccaagtcaccctgccccatcaacggtaactggggaccctgg tcactatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgactccaaggcttct cagcagtgcaacaagaacgcctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgcccctctgct tactctggtgacggcatcaagtgcaaggacattgacgagtgcaaagaggttcctgacgct tgcttcgtgttcaacggagtacaccgctgtgagaacactgaccctggctacaactgtctg ccctgtcccacacgctactctggacctcagcccttcggcaggggagtggaggaagccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgacctcatgtaccgctgtgagtgt aagcctggctatgctgggaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggacggtgttggtgacgcttgt gacaacgatgatgacaatgatggtattgctgacgacagggataactgtccgttcgtgtac aaccccaggcaatatgactatgacagagatgatatcggagatcgttgtgataactgtcct tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgacggagatggcattctgaatgagaaagataactgcccgtacgtctacaac gtggaccagagagacactgacctggacggtgtgggagacatgtgtgacaactgtccgctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagacggccaccagaacaacctggacaactgcccctacatcccc aacgctaaccaggccgatcacgacaaagacggaaagggagacgcttgcgaccacgatgat gacaatgacgggatcccagacgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgatggtcgaggagacgcttgcaaagacgactttgaccaagacaat gtgcctgacatctacgacgtatgtccggagaactttgacatcagcgagaccgacttcaga aagttccagatggttcccctggaccccaagggaacgtcccagatcgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggaaccttcttcatcaatacagagaga gatgatgactacgccggctttgtgttcggctaccagtccagctccaggttctacgtggtg atgtggaaacagatcacacagacctactggaacaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactccactactggacctggagagcacctcaggaac gctctctggcacactggcaacaccacaggacaggtgaagactctttggcacgaccctaag aacattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattctgggagcata tacgacaagacgtacgcaggcggaagactaggcctctttgtcttctcccaagagatggtg tacttctcagacctcaagtatgaatgcagagatgcataa

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