Salvelinus namaycush (lake trout): 120019539
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Entry
120019539 CDS
T07522
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120019539
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120019539
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Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
120019539
NCBI-ProteinID:
XP_038818766
UniProt:
A0A8U0P6G3
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Position
Sna24:complement(25719560..25846693)
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AA seq
2000 aa
AA seq
DB search
MALLVHLKMVRDLRGKADRIAKVTFRGLSFYTRVLENCEDEARFDEMFRWPIASRVDENE
ILELQVFNYSKIFTNRVIGTFRMVLQKVAEEGHLEVTDTLIDDNNTAIGTSVTVDIKYTT
MDGTVGVWSDGEFLDVPGDPEGTFQFETDSLLSGHSHGSGSGVSPGRSIHGIPTFRKAGK
GVFSAMKLHKSKSSRDDHKKDEPATLDMEDLDRKALRLGGVGGLDPDCISLASVTAVTTN
VSNKRSKPDIKMEPSSGRPVDYQISITVVEARQLVGLNMDPVVCVEIGEDKKYTSMKEST
NCPYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQF
YHKWAMLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPL
ERQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVVFAGQRGKTSVQKS
SYEPIWNEQVVFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTM
GPAWVNMYGSTRHYTLIDEHQDLNEGLGEGVSFRARLLISVAVEILDITSTEIVSSTEVQ
VEPVSNISESATGKIEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPTA
AKKKKKKEGGGESDEEESELIQQNSSEDEADDDGDLVSVSSTPPMKPVITDRNYFHLPYF
EKKPCIYIKSWWQDQRRRLYNSNIMDKIADKMEEGLNDVQEVIKTEKAYPERRLRGVLEE
LSTGCNRFVTLANKDQNQAGRTKLDKERLKSCMREMESMGQQAKLIRSQVKRNTVRDKLK
MVQNFLHRLRFLADEPQHSIPDVFVWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKV
KAVFLRLPGKKGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSGLPNGFEENKAPRTSPCLQ
SVPPISLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCP
TWDQLLVFDDVELFGEAGELRDDPPIIVVEVYDQDTVGKAEFIGRTFAKPITKMCDEHYG
PLRFPPQLEYYQIYRGNSTAGDLLAAFELLQIGQGGRAELPPIDGPTDSERGPILPVPMG
IRPILSRYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGRGVQSALIQNYKKNPNFSTLV
KWFEVDLPENELLHPPLNVRVVDCRAFGRYTLVGSHAVTSLRRFIYSPPDKTHNNWASAG
DVTVNMDADPSVRKMDTVVKLDATSDAVVKVDVNEEKEEKKRKKKKKKGEVEEDDETDES
MLDWWSKYFASIETLMEILRAQDAALAEAEEREDQEIAAEGADIKPDDLPVKGFKGKEKS
RDKSRNKEKKKSHHAGEGTEKHSSKPKVDELLVYNKELEAEYDNFEDWLHTFNLYRGKAG
DDDEAALDDDRIVGRFKGSMCMYKLPLSEEITREVGFDPNMGMFQSIPHNDPINVLVRIF
VVRATDLHPADVNGKADPYVVIKLGKSELKDKENYISKQLNPVFGKAFDMEATFPMESML
TVSVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIANSYSVHGYNVWRDPMKPSQILA
KLCKEGKLDGPHYGPGGRVKVANRVFMGTTEIEDENGLKKQTDEHLALTVLKHWEEIPRV
GCKLIPEHVETRPLLNPDHPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVI
IWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPF
DYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRG
AKTAKQCSINMVQNQAELPCISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLMSAE
EAEKSPVGLGRNEPDPLEKPNRPDTSLMWFVNTLKSIRYFIWHNYRWLILKALGLLLLLL
LLGLFLYSFPGYLVKKMLGA
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggctcttttagtccacctaaaaatggtccgggaccttcgcggaaaggcggacagaatc
gccaaagtcacatttcgaggtctgtcgttctacacacgtgttctggagaactgtgaggat
gaggccagatttgatgagatgttccgatggccgattgccagtagagtggatgaaaacgag
atactggagcttcaagtgttcaactacagcaaaatcttcaccaacagagtcattggaacc
ttccggatggttctacagaaggtggcggaggaggggcatctggaggtgacagacacactc
atcgatgacaacaacaccgccatagggactagtgttaccgtagacatcaagtacacgacc
atggatgggacagtgggggtgtggagcgatggggaattcctggacgttccgggcgaccca
gagggaacgttccagtttgagacagacagcctgctttccggacacagccatggatcagga
tcaggagtgtctcctggacgatccatccacggaattcccactttcaggaaagcagggaag
ggggtattctcagccatgaagctccacaagagcaagagctccagagacgaccacaagaaa
gatgagccagccaccctggacatggaggatctggacaggaaggccttacgtctgggaggg
gttgggggtctggacccagactgcatctccctggcatccgtcaccgccgtcaccaccaat
gtctccaacaagaggtcaaagcctgatatcaagatggaacctagttctgggaggcctgtg
gattaccagattagcatcacagtggtcgaggccaggcagctggtaggcctaaacatggac
cctgtggtctgtgtggagattggggaagacaagaagtacacctccatgaaggaatccacc
aactgcccctactacaatgagtattttgtctttgacttccacgtcccaccagatgtcatg
tttgacaagatcctcaagctctcagtgatccactccaagaacctgctgcggagtggcacc
ttggttggcaccttcaagctagatgttggcaccgtctactcccagcctgagcaccagttc
taccacaagtgggccatgctgtctgaccctgatgacatcacggcggggtgcaaaggatac
atcaagtgtgacatcgccgtggtggggaagggggacaatatcaagactccccacaaagcc
aacgagacggatgaagacgacatagaggggaacctcctgcttccagagggagttccgttg
gagaggcagtgggcgcggttctacgtgaagatctaccgagccgagggccttcccaagatg
aacaccagcatcatggccaatgtgaagaaggccttcataggggagaacagagacctggtg
gacccctacgtacaagtggtcttcgctggacagagagggaagacgtctgtccagaagagc
agttatgagcccatctggaacgagcaggtggtcttcacagagatgtttcctccgctctgc
aaacgcatcaaggtccagatacgagactctgacaaagtcaatgacgttgccataggaacg
cacttcattgacctgcgaaagatcgccaacgatggtgacaaagggttcctccccaccatg
ggcccagcctgggtcaacatgtatggctcaacccgccactacactctgattgatgagcac
caggacctgaatgaggggctgggggaaggtgtgtccttcagggcccgcctcctcatctct
gttgccgtagagatcctggacatcacctccactgagattgtgagctccaccgaggtgcag
gtagagcctgtctccaacatctcagagagtgccacagggaaaatagaggaattcttccta
tttggttccttcctggaggccaccatgattgacaggaagatcggcgataagccaatcagc
ttcgaggtcacaataggtaactacggcaaccagatagacggagtgagcaagcccaccgca
gctaagaagaagaagaagaaagagggaggaggagaaagtgatgaggaagagtcagagctg
atccagcagaactccagtgaggacgaggcggatgatgatggggacctggtgtctgtgtcc
tccacccctcccatgaaacctgtcatcacagacaggaactacttccacctgccctacttt
gagaagaagccatgtatctacatcaagagctggtggcaggaccagaggagacgactctac
aactccaacatcatggacaagatcgctgacaaaatggaggagggtctgaatgacgtgcag
gaggtcattaagacagagaaggcctatccagagcgcagactccgaggggtgctggaggaa
ctcagcactggctgcaatcgtttcgtcactttggccaacaaagaccagaaccaggcaggc
agaactaaactggacaaagagagactcaagtcctgcatgagagaaatggagagcatgggg
cagcaggccaagctgattcgctcccaggtgaagaggaacacggttagagacaaattgaag
atggttcagaacttcctgcacaggctccgtttccttgccgacgagccccagcacagtatc
ccagacgtgtttgtatggatgatgagtaacaacaagcgtatcgcctacgcccgcatcccc
tccaaagacatcctctactccatcgtagacgaggagacaggcaaggactgtggcaaggtc
aaagctgtcttcctcaggctgcctggtaagaaggggtttggtccagcgggttggacagtg
caggctaagatggagatgtacctgtggctgggcctcaacaaacagaggaaggacttcctg
tctggcctgcccaacggctttgaagagaacaaggctcccaggacaagcccctgtttgcag
tctgtaccccccatcagtctggtttacaacatgaagcaggtgttccagctgagggctcac
atgtaccaggccaggagtctgtttgctgcagacagcagtggcttgtcagacccctttgcc
agggtattcttctccacacatagccaggtcactgaggtcctgagtgagactctgtgtcct
acgtgggatcagctgctggtgtttgatgatgttgagctgttcggggaggccggcgagcta
cgagacgacccgcctatcattgtggtagaggtctacgaccaggacactgtgggcaaggca
gagttcattggtcggacgtttgctaagcccatcacgaagatgtgtgacgagcattacggc
cccctgaggttccccccacagcttgagtactaccagatctaccgtggtaactctaccgcc
ggtgacctactggctgccttcgagctgctgcagattggacaaggggggagggcagagctt
cctcccatcgatggtccgacagactcagaacgtggacccatcctccctgtacccatgggt
atccgacctatcctcagccgctaccgcatagaggttctgttctggggcctgagggacctg
aagagggtgaatttggcccaggtggacagacccagggtggacatagagtgtgcagggaga
ggagtccagtctgctctcattcagaactacaagaagaaccccaacttcagcaccctcgtc
aagtggtttgaggtggacttgccagagaatgagctgcttcaccctcctctgaacgtccgg
gtggtggactgcagggcgtttggccgctacaccctggtgggttcccatgctgtcaccagc
ctgcgacgcttcatctacagcccaccagacaagacacacaacaactgggccagcgcaggt
gatgtcacagtcaacatggatgccgacccctcagtcaggaagatggacacggtggtcaag
ttagacgctacgtctgatgcagttgttaaagttgatgtgaacgaggagaaagaagaaaag
aagaggaagaagaagaagaagaagggagaggtggaggaggacgatgagacagacgagagc
atgctggactggtggtccaaatattttgcttccatagagacactgatggagatcctcagg
gctcaggatgcagctctagccgaggcagaggagagggaggaccaggagatagcagcagag
ggagcagatatcaaacctgatgacctccctgtaaaaggcttcaaggggaaggagaagagc
cgagacaagagcaggaacaaggagaagaagaagagccaccatgcaggagaggggacagag
aaacactccagcaaacccaaagtggacgagctgctggtgtacaacaaggagctggaggca
gagtatgataactttgaggactggctccacaccttcaacctgtacagagggaaggcaggg
gacgacgatgaagcagccctggatgacgacaggatcgtgggcagattcaagggctccatg
tgcatgtacaagttgcctctgtctgaggagatcacccgggaggtgggctttgaccctaac
atgggcatgttccagagcattccacacaatgaccctatcaacgtgctcgtgcgcatcttc
gtggtcagggccacagacctccaccctgctgatgtcaatgggaaagcggacccctatgtt
gtcatcaaactgggcaagtcagagctgaaggataaagagaactatatctccaaacagctc
aaccctgtctttggcaaggcgtttgacatggaggctacgttccccatggagtccatgttg
acagtgtcagtgtatgactgggatctggtgggcactgatgacctcatcggggagaccaag
atcgacctggagaaccgcttctacagcaaacacagagctacctgtggcatcgctaacagc
tactctgtacatggttacaacgtgtggcgtgaccccatgaagccaagccagatcctggcc
aagctgtgtaaggagggcaagctggacggcccccactacggccctgggggcagggtcaag
gtcgccaaccgcgtcttcatgggtaccacagagatcgaggatgagaatggtctgaagaag
cagacagacgagcacctggccctgacggtcctgaagcactgggaggagatccccagggtg
ggctgtaaactcatcccagaacacgtcgagacaagacccctactcaaccctgaccaccct
ggcattgagcaggggcggattgagatgtgggtagacatgttccccatggacatgccagca
cctggacccgccattgacatatcaccacgtaaaccaaagaaatatgagctcagggtgatt
atatggaatacagacgaagtaatactggaggacgatgattacttcactggggaaaagtcc
agtgacatatttgtcaggggctggctgaagggtcagcaggaggacaagcaggacacagac
gtccactaccactctctgacgggcgaggggaatttcaactggcgcttcgtgttccccttc
gactacctgatggctgaggagaagatcgtcatctccaaaaaggagtccatgttctcctgg
gacgagaccgagtacaagatccctgcacgcctcaccctgcaggtctgggacgctgaccac
ttctccgctgatgacttcctaggtgcgatagagctggacctgaacaggtttccccgcggg
gcgaagacagccaagcagtgttctataaacatggtccagaaccaggcagagctgccttgc
atctccatcttcaaacagaaaagagtcaagggctggtggccattcgtggctcgcgacgag
aacgacgagatggaactcacgggtaaagtggaggcggagcttcatctcatgtcggcagag
gaggcggagaaaagtcctgttggtctgggacgcaatgagcctgaccctctggagaaacca
aatcgcccggacaccagtctcatgtggtttgtgaacaccctgaagtccatccgctacttc
atctggcacaactaccgctggctgatcctcaaggccctgggcctgctgttgctgctactc
ctgttgggtctattcctatactccttccctggatacctggtcaagaagatgttgggggcc
tga
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