Salvelinus namaycush (lake trout): 120020166
Help
Entry
120020166 CDS
T07522
Name
(RefSeq) transcription factor E2-alpha-like isoform X1
KO
K09063
transcription factor E2-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120020166
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
120020166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
120020166
NCBI-ProteinID:
XP_038819578
UniProt:
A0A8U0P7W4
LinkDB
All DBs
Position
Sna25:7118950..7159901
Genome browser
AA seq
641 aa
AA seq
DB search
MATVGTDKELSDLLDFSAMFAPPVSNGKNRPTTLASSQFGGSGIDERSGPGPWVSGEQNS
PSFNQGRGYGEGAHYNEHEGLASTPLFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRPTQESMDAQPKKIRKVPPGLPSSVYASASGEEYNRDG
AGYPASKPGNVAYPGSFYMQEGLHPSPDPWSSGGSMGQPGYSTAMLGNSPHLGQPTPFTA
INPQDRLKRQPLPLSPQNYPLHGSEVNGSFHSGSTGYGVSNHTSPINGTDSIMANRGTGS
SGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWPRGSGQATPSPNFEGGL
QALQNKMEDRLEEAIHVLQRHAGGQGGPGGLADMHSLLSAGIGGLAQAFNNAGLGLANRL
PNLMSNHHEDSTGGGVHGHHGPPSGSQPEGFTSLPRSTHSSSGSDIKREDKEDDENSSVA
DKSEDEKKDSKARTRTREMFSFQTFSSSLSDTGADRDDEDEDEEDLPPEVKVEREKERRV
ANNARERLRVRDINEGFKELGRMCQLHLTNEKPQTKLLILHQAVNVILNLEQQVRERNLN
PKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVSHM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgggaacagacaaggagctcagcgacctgctggatttcagtgcgatgttt
gcaccaccggtgtcaaatgggaagaacaggcccaccactctagccagcagccagtttgga
ggctccggtatagatgagcggagcggtcctggcccctgggtatcaggagaacagaacagc
ccttccttcaaccagggacggggttatggcgaaggagctcattacaacgagcacgaaggc
ctcgcttccacccccttgttcggctcggggatcgttgggaaagctgagcgaggaccctac
tcttcttttggcgcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtcaccctcgggcctgaagtctggctcccagttctacccctcccaattcaaccct
cgcaggagacccacccaggagagcatggatgcccagccaaaaaagatcaggaaagttcct
cctggcctgccctcttcggtgtatgcatcggcctcaggagaggaatataacagagacggt
gcagggtatcctgcctccaagcctggaaatgtagcctaccccggctccttctacatgcaa
gaaggcctgcacccctcccctgacccatggagttctggcgggtcgatggggcagccgggc
tactctacagccatgctgggtaactccccccacctgggccagcctacacccttcacagcc
atcaacccccaggacagactgaaacgccagccgctgcctctctcgccccagaactacccc
ctgcacggcagcgaggtgaacgggagcttccactcaggatccactggctatggagtctcc
aaccacacctcccccatcaacggaacagacagcatcatggccaaccgggggacaggaagc
tcaggagatgagatcggcaaagccctggcatcgatttatccctcagatcacaacagcaac
accttcccatcatctccgtctactccagtgggctctccccaggccatagcaggttctgcc
tctcagtggcctcggggctcgggacaggccacaccctctccaaacttcgagggtggactg
caggctctgcaaaacaagatggaggatcgtttggaggaggccatccatgtgctccagcgt
cacgccgggggacaagggggtccaggggggctggctgacatgcacagcctcctcagcgct
gggataggagggctcgcccaggccttcaacaacgctggcctgggattggccaacagactg
cccaacctgatgtccaaccaccacgaggactcgactggtgggggtgtgcatggtcatcac
ggccctccctctggcagccagcccgaaggcttcaccagcctccctcgctccacacactca
tccagtggctctgacatcaaaagggaggacaaggaggatgacgagaattcctctgtggct
gacaagtcagaggatgagaagaaagactcgaaggcccgcactcgaacaagagagatgttc
tccttccagaccttctcctcctccctatcagacacgggagcagatcgtgatgatgaggac
gaggacgaagaggatctgccgccggaggtgaaggtggagcgggagaaagagcggcgggtg
gcgaataatgcccgcgagcgtctgcgcgtgcgggacatcaacgagggctttaaggagctg
ggccgcatgtgtcagctccacctgactaatgagaaaccccagaccaaactgctcattctg
caccaggccgttaatgttatactcaacctggagcagcaagtccgagagcgtaacctgaac
cccaaggcagcgtgtctgaagcggagggaggaagagaaggtttcgggggtggacccccag
atgcagatgggaggggggcaccccgggttagggggcgatggacacaactctgtcagccat
atgtaa
DBGET
integrated database retrieval system
