KEGG   Salvelinus namaycush (lake trout): 120020313
Entry
120020313         CDS       T07522                                 
Name
(RefSeq) plakophilin-1-like
  KO
K10387  plakophilin 1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120020313
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filament-binding proteins
    120020313
SSDB
Motif
Pfam: Arm ARM_ARMC5 HEAT HEAT_EZ Atx10homo_assoc Cnd1 Arm_2 HEAT_2 Adaptin_N LTN1_E3_ligase_6th
Other DBs
NCBI-GeneID: 120020313
NCBI-ProteinID: XP_038819818
UniProt: A0A8U0P8C6
LinkDB
Position
Sna2:complement(8653865..8663365)
AA seq 654 aa
MVLSSKGSTVQRNMSSSSQWERRFPLSPPVARGQRNSSRSVPDMDPFPFPTTTQRPAQAP
ASALQQLQSSVPARQLQSNRSSFFLTERGNSQFISNGNAPSQVIVNGNDVQKKHSQLIAT
RQTKSSGQITSSQTRIERAPSNPSMAEPKISAGKSKIEAGMNDDGQLADITMTEAVQYLS
SGDVNYQHYGASFIQHSTYSEDKAKQEVLRLKGIPPLVNLLKSPSPQVQQTASAALRNLA
FKDAGNKEEVQRCGGITEALALLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVL
TETVVVPYTGGVDETNKNLDPEVFYHATACLRNLSCATQSNRQAMRNCRGLIDSLGSYVQ
DCVAAERPDDKSVENCVCVLHNLSFQLESEAPALFSRITALAGTVSRANASAETGPIGCF
SQQSSKIQEQESHFDYPVMEEQHPKGAGWLFHSKTMQSYLSLLRSSQREDTLEACCGALQ
NLTANQGIVSRVMSQNIVQKLNGLPEISRLLQSPNPSLQKTAVALVSNLAKNQRLQSIMA
RQTFPDLVGVLSSWTKEGTESDDTLAMACQTSHSLLMKEPELGKRLLSNNLVNSLNDLSK
NRLFPKASKAAGVLLYSLWSEKDIQSFLKKQGMNKGSFVNDITSVAHRSVQVVE
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggtactgtcctccaagggatctactgttcagagaaacatgagcagctccagccaatgg
gagagacgattccctctcagtccccctgtagccaggggtcagcgcaacagcagccgcagt
gtgcctgatatggaccccttccccttccccaccactacacagcgccctgcccaggccccg
gcttcagccctgcagcagttgcagtcctcggtccccgcccggcagctccaatccaacaga
tccagcttcttccttactgagaggggcaacagccagttcatctccaacggcaacgccccc
tctcaggtcattgtcaatggcaacgatgtgcagaaaaagcacagccagttgattgccacc
cgtcagacgaaaagcagcggccagattaccagcagccaaactcgtattgagagggcacca
tcgaacccctccatggccgagcccaagatatcagcgggcaagagcaagattgaagcaggg
atgaatgatgatggccagcttgctgatattaccatgacggaggcggtgcagtacctgtcc
agtggagatgtgaactaccagcactatggcgcctcattcatccaacactctacctactca
gaggacaaggccaagcaggaggtgttgcggctcaaagggatccctcctctggtgaacctg
ctgaagagtcccagtccccaggtccaacagacagcctcggccgccctgcggaaccttgcc
tttaaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatcactgaggcccta
gccctgctccgagacacagactctaccgagacacagaaacaactcacaggtctcctttgg
aacctgtcgtctgcagacagtctgaagccagagcttgtgcgtagcgctctgcctgttctg
actgagactgtggtagtaccttacacaggaggagtagatgagaccaacaagaacctggac
ccagaggtcttctaccatgctacagcatgtctacgaaatctgagctgtgcgacgcaaagc
aacaggcaagccatgcgtaactgtcgaggcctcatcgactctctgggcagttacgtccag
gattgtgtagctgcagagaggccagatgacaagtctgtggagaactgtgtctgtgtcctg
cacaacctgagcttccagctggagagtgaggccccggccctgttcagccggatcactgcc
ctggccgggaccgtcagccgggccaacgcctccgctgagaccggccccattggctgtttc
agccaacagagcagcaagatccaggagcaggagagtcactttgactaccccgtgatggag
gagcagcatcctaaaggagcgggctggctcttccactctaagaccatgcagagttacctg
tctctgctgaggtccagccagagagaagacaccctggaggcctgctgtggagccctgcag
aacctcaccgctaaccaaggcattgtttctagagtgatgagccagaacattgtccagaag
ctgaacggcttgcctgaaatctctcgcctgctgcaatctcccaaccccagcctacagaag
actgctgtggctttggtgtcaaacctagccaagaaccaacgccttcagagcatcatggcc
cgacagacgttcccagacctggttggcgtcctcagctcatggaccaaggaagggacagag
tctgacgacaccctggccatggcgtgccaaaccagccacagtcttctgatgaaggagcct
gagctggggaagcgcctgctgagcaacaacctggtcaactcactcaacgacctgagcaag
aacaggcttttcccaaaggcaagcaaagctgcaggtgtgctcctctacagcctctggtca
gagaaggacatacagagtttcctaaaaaagcaagggatgaataagggttcctttgtgaat
gacatcaccagcgtggctcacaggtctgtgcaggtcgttgagtaa

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