Salvelinus namaycush (lake trout): 120020638
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Entry
120020638 CDS
T07522
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120020638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120020638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120020638
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120020638
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
Protocadherin
RIFIN
TMEM154
Stevor
He_PIG
DUF6097
Adeno_E3_CR2
EphA2_TM
DAG1
SKG6
LRRC37AB_C
Orf78
Motif
Other DBs
NCBI-GeneID:
120020638
NCBI-ProteinID:
XP_038820276
UniProt:
A0A8U0TLR5
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Position
Sna25:10795224..10803822
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AA seq
342 aa
AA seq
DB search
MTEDETRLPCQFQVQENEQVVQVSWIKELPDGTKEHIITAHRTEGHTEFGRYSGRVRFES
SRSMVNSALLILTTEESDEGKYICHISTFPYGNFERKLSLTVWTFPISSLDPVVLEEGQS
FHVAASCRSVARPPPRLTWDTDLPGQAQNRSSEGGAVSTHFSLHPLRSMNGMRLDCLVWH
PALEQPRRISNRLVVQFPPDASVTGFDGNWYMGLKEAELRCESGGNPKPKNFTWTRDGKA
LPDGLTVDGARLLFGRALRRNDTGVYECVVNNGVGTRKVKCNITVTETSRSVQEVIFDTL
VMIIIAVAAGVLVIVMIIVIILVNRYHRRKNSKLEMELSKRM
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggatgagacacggctgccctgtcagttccaggttcaggagaacgaacaggta
gttcaggtcagctggatcaaggagctacctgatggcaccaaggaacatatcatcaccgcc
caccgcacagagggacacacagagtttgggcggtactctgggagagtgaggtttgagagc
agtcgctccatggtgaactctgctctgctcatcctgaccacggaggagtctgatgagggg
aaatacatctgtcacatcagcacattcccctatgggaactttgagaggaagctgtcactc
actgtgtggaccttccccatctcctctctggacccggtggttctggaggagggccagtcc
ttccacgtggctgcctcctgccgctctgtggctcgccctccaccccgcctgacctgggac
acggaccttcctggccaggcccagaaccgcagctccgagggcggggccgtgtccacccac
ttctccctgcaccccctgaggagcatgaatggcatgcggttggactgcctggtctggcac
cctgctctggaacaaccccgcaggatcagcaaccgcctggtggtgcaatttcccccagat
gcatctgtcaccggctttgatggcaactggtacatgggactgaaggaagctgaactccgt
tgtgagtctggaggaaaccccaaaccaaaaaacttcacctggaccagggatggtaaggct
ctgccagatggtctgactgtggatggagcaaggcttctgtttggccgagccctgagacgg
aatgacactggagtttatgaatgtgtggtgaacaacggcgttgggacaaggaaagtaaaa
tgtaacatcacagttacagagacatctcggagtgtgcaggaagtgatctttgacactcta
gtgatgatcattatagctgtggctgctggggtgttggtcatcgtcatgatcatcgtcatc
attttagtcaaccgataccacagacgcaaaaacagcaaattagagatggagcttagtaaa
aggatgtga
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