Salvelinus namaycush (lake trout): 120021690
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Entry
120021690 CDS
T07522
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120021690
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021690
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120021690
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120021690
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_5
Ank_4
YVC1_C
LHD_TRPY1
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120021690
NCBI-ProteinID:
XP_038821454
UniProt:
A0A8U0TLU5
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Position
Sna26:complement(31331643..31343130)
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AA seq
570 aa
AA seq
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MNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLLS
HRRPGGEKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDYLSEELDPKDCRDLAKLKLAIKYH
QKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPRSALG
LFIKKPFIKFICHTASYLTFLFLLLLASQRIVRTDLHVQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKLVAYFKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKASDEPNNCKGIRCEKQNNAFST
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatggcccagctgtactacaagaaggcgagctactcaccgtaccgcgaccgc
atcccgctgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtacctg
acggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcagagatt
tactacaacatcaacgtgaactgcctggacccgctggggcgcagcgctctgctcatcgcc
atcgagaacgaaaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtgggc
gacgcgctgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctgtcc
caccgcaggcccggtggagagaaacaggtgcccaacctgatgatggatacccagttctca
gagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactacgagatc
atcaagctgctggtccagcgcaaagtcaccatcccccggccacaccagatccgctgtgac
tgtgtggcgtgcgtgtccagctccgaggtggacagcctgcgccactcccgctctcgcctc
aatgtctacaagactctagccagcccgtccctcattgccctgtccagcgaagaccccatc
ctgaccgccttccgcctgggctgggagctgaaagaactgagcaaggtggagaatgagttc
cgtcaggaatacgaggagctgtcccaacagtgtaagctgtttgccaaggacctgctggac
caggcccggagctccagagagctggagaccatcctcaaccaccgtgactatctcagtgag
gagctggacccaaaggactgccgcgacctggccaagctcaaactggccatcaagtaccac
cagaaagagtttgtgtcccagccaaactgccagcagctcctggccaccctgtggtacgac
ggtttcccggggtggcgcagacgccactgggcggtcaagctggtcacctgctttaccatc
ggcctgctcttccccatcttctccctggtctacctgctggcccccaggagtgccctgggc
ctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgactttc
cttttcctcctcctcctggcctcccagcgcattgtgagaacagacctgcacgtccagggc
ccaccgcccaccgtggtggagtggatgatccttccctgggtgctgggctttatctgggct
gagataaaggagatgtgggacggcggtttcactgagtacgtccatgactggtggaacctg
atggactttgctatgaactctctctacttggccactatctcactgaaactagttgcttac
ttcaagtacaacagctctcggccgcgggaggaatgggagatgtggcacccaacgctgata
gccgaggccctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctgttc
acagccaactcccacctgggacctctgcagatctccctgggacgcatgctgctggacatc
ctcaagttcctcttcatctactgcctggtgctgctagccttcgccaacgggctcaaccag
ctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatccgc
tgtgagaagcagaacaacgccttctctacgtga
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