Salvelinus namaycush (lake trout): 120022450
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Entry
120022450 CDS
T07522
Name
(RefSeq) poliovirus receptor-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03266
Virion - Herpesvirus
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
snh04520
Adherens junction
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120022450
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120022450
04517 IgSF CAM signaling
120022450
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120022450
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120022450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120022450
04090 CD molecules [BR:
snh04090
]
120022450
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120022450
CD molecules [BR:
snh04090
]
Proteins
120022450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
C2-set_2
V-set
Ig_2
I-set
Ig_PVRIG
TM_ErbB1
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
K-cyclin_vir_C
Ig_CD22
PycTM
DUF4342
Motif
Other DBs
NCBI-GeneID:
120022450
NCBI-ProteinID:
XP_038822283
UniProt:
A0A8U0PBV8
LinkDB
All DBs
Position
27:30589967..30666259
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AA seq
519 aa
AA seq
DB search
MARDAKHCPVSPMKNSLLVTAGILLIIQAASCQRVRVDPEVEAYPTESVDLRCQFVDEGN
TKLTQVSWIWEPTEGQRDNIAVFHPIYGESFPDSPFNGRVRFIQGTLTNPSITITSLKMA
DAGRYTCEYATYPSGNEQGTTNLVILAKPKNSASPVIVQASTSGKPVVVAQCEAADGKPA
ATIKWMGEVGGTDNTTSKKGLDGTVTVRSVYLLVPTPEDNGKEVTCMISQRTQDKPQTFP
MKLSVEYPPTVSIVGYDNNWYIGRTDAVLTCQATGNPVPTNVTWTAMSGRMPDTVQIADN
KLIVRKVDEAVNTTFVCEVKNRLGVSKHQVTTAVIEAIVDPSNAGMVAGAIIGSLLALLL
VSSLIAVLVTRSRRQRRGYPGNGEPGAYGNKARLFGGAGNKNEGTGANINGPIYTYRESD
PGALAENVNDFHGPPGSTPTAHDILLSSEMDEAERRKFDALGDSLEEEEERYDSFSVGMV
PAYHIHRHNEEMGGVSMYLDDDMESQRDGSVISRTAIYV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagacgctaaacattgccctgtatcaccaatgaaaaacagtttgctggtgaca
gcagggatacttctgattattcaagctgcttcgtgtcagcgggtgagggtggatccagag
gtggaggcgtaccctaccgagtcggtcgacctgcgctgtcagtttgtcgatgaaggaaac
accaagctcacacaggtgtcgtggatatgggagcccacggaaggccagagggacaacatt
gccgtctttcaccccatatacggcgaaagcttccccgactcgcccttcaacgggcgtgtc
cgcttcatccaaggcaccttgacaaacccctccattaccatcaccagcctcaagatggct
gacgccgggcgttacacctgcgagtacgccacttaccccagcggcaatgagcaaggcacc
accaatctggtcatacttgcgaaacccaagaattctgcatctcccgttatcgtccaggcc
agcacaagcggcaaaccagtggtcgtggcccagtgtgaggcggccgacggcaagccagca
gccaccatcaagtggatgggagaagtcggtggcaccgataacaccacctccaaaaaaggt
ctggacggcacggtgacggtgaggagcgtgtacctactggtgcccacgcccgaggacaac
ggcaaggaggtcacctgcatgatcagccagcgcactcaggacaagccgcagaccttcccc
atgaagctgtccgtcgagtatcccccgactgtgtccatagtgggctatgataacaactgg
tacattggccggaccgacgctgtcctgacctgccaggccactggcaaccctgtccccacc
aacgtcacttggacagccatgtccggtcggatgcctgacacggtacagatcgccgacaac
aagctgatcgtgcggaaggtggacgaggcagtgaacaccacctttgtctgcgaggtgaag
aaccggctgggagtgagcaagcaccaggtcaccacggcggtcatcgaggccatagtggac
ccgtccaacgcaggcatggtggcgggggctatcatcggcagcctgctggccctgctgctg
gtcagctcgctgattgctgtcctggtgacccgcagtcgccggcaacggcgcggttacccc
ggcaatggagagcctggcgcctacgggaacaaagcccgcctcttcggcggagctggcaac
aagaacgaaggcacgggggccaacatcaacgggcccatctatacgtaccgcgagagcgac
cccggagcgctggcggagaatgtcaacgacttccacggcccgccaggctccactcccacc
gcccacgacatcctgctgagcagcgagatggacgaggcggagcgcaggaaatttgacgcc
ctcggcgacagcctggaggaggaagaggagcgctacgacagctttagcgtgggcatggtt
ccagcctatcacatccaccggcacaacgaggagatgggaggggtcagcatgtacctcgac
gacgacatggagtcacagcgggatgggtcggtcatctcccggactgccatctacgtctag
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