Salvelinus namaycush (lake trout): 120022601
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Entry
120022601 CDS
T07522
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04060
Cytokine-cytokine receptor interaction
snh04150
mTOR signaling pathway
snh04210
Apoptosis
snh04217
Necroptosis
snh04350
TGF-beta signaling pathway
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh04625
C-type lectin receptor signaling pathway
snh04920
Adipocytokine signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120022601 (tnfa)
04350 TGF-beta signaling pathway
120022601 (tnfa)
04150 mTOR signaling pathway
120022601 (tnfa)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120022601 (tnfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120022601 (tnfa)
04217 Necroptosis
120022601 (tnfa)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120022601 (tnfa)
04621 NOD-like receptor signaling pathway
120022601 (tnfa)
04622 RIG-I-like receptor signaling pathway
120022601 (tnfa)
04625 C-type lectin receptor signaling pathway
120022601 (tnfa)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120022601 (tnfa)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120022601 (tnfa)
09171 Infectious disease: bacterial
05132 Salmonella infection
120022601 (tnfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120022601 (tnfa)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120022601 (tnfa)
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Tumor necrosis fators
120022601 (tnfa)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Cytokines
120022601 (tnfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
120022601
NCBI-ProteinID:
XP_038822501
UniProt:
A0A8U0PDJ8
LinkDB
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Position
Sna27:3271017..3274561
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AA seq
244 aa
AA seq
DB search
MEGDCSRVMVDVESGPVYPATTVTLVRDKSTPQRRLCGALLAIALCVSAALFITWHAKKQ
DHVEEVDELQHTLRQLSENRKTAIHLEGEYNVSGKYKTAVEWTEVVGQGFSQGSLKLNNN
EIVIPQPGLYFVYSQVSFHVSCKADPKHPNNQKMVHLSNTVKRWSPSYGTEDNKEYLPLL
SSVRTVCKKSSNSEESEGKWYNAVYMGAVFSLEKGDMLRTKTETRLLPHLESGAGKNFFG
LFAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgattgcagcagagtgatggtagacgtggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggacaagtccacaccccagcggaggctgtgtggtgccctg
ctggccattgcactgtgtgtctcagctgcgcttttcattacctggcacgccaagaaacaa
gatcacgtcgaggaagttgatgaacttcagcatacattgagacaactctctgaaaacaga
aagactgccattcatttagaaggtgaatacaacgtcagtggaaaatacaagaccgcagtg
gagtggacagaagtggtaggccagggattctcacaggggagtcttaaactcaacaacaac
gagattgtgatccctcagccgggcctttacttcgtctacagccaggtctcttttcacgtc
agctgcaaggcagaccccaagcaccctaacaaccagaagatggttcacctgagtaacacg
gtcaagcgctggtccccaagctacggcaccgaagacaacaaggagtacctgccgctgctc
agctctgtacgcaccgtgtgtaagaagtcttccaacagcgaggagagcgaaggaaagtgg
tataacgccgtgtacatgggagcagtgttcagcctggagaagggagacatgctccggacg
aaaacagagaccaggcttctgccccatctggagagtggtgctgggaagaacttttttggc
ttgttcgccttgtga
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